>PF19167 (214 residues) TWIITAVILFILAAILVAIVVYWVTSSSSSAGQRYGPPVPIQPVSPSTPVQPVTPALPLR PEASKQERLPDGRYRIRWGRTGPYVGVSQKADGTTAATLVDAPAAITWTFTSTNASYVGG GQWTTPASVGLSTGGAWLLPTPILVQGGGVPLTALQAWAPMRGVALDGSIYGGALHNIAY TGCARPSGTGAVGDGLVLYGDCGVDSLNWYYEPA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | TWIITAVILFILAAILVAIVVYWVTSSSSSAGQRYGPPVPIQPVSPSTPVQPVTPALPLRPEASKQERLPDGRYRIRWGRTGPYVGVSQKADGTTAATLVDAPAAITWTFTSTNASYVGGGQWTTPASVGLSTGGAWLLPTPILVQGGGVPLTALQAWAPMRGVALDGSIYGGALHNIAYTGCARPSGTGAVGDGLVLYGDCGVDSLNWYYEPA | |||||||||||||||||||
1 | 4g9mA | 0.12 | 0.07 | 0.58 | 0.70 | DisCoVER | ---------------------------------------------------------------------PAGTYTLKNVSTGTVLDLWRGEGTAIQGYKSHGGDNQKWRLKWTGKGNQVTLQNVGTYVGTAIQNSVNVVGAVPLDIVAADKGFAIEAADH-----RLFVLDLKES--------------NPANETPVIYYNNNADNQKWKFID- | |||||||||||||
2 | 6fhwA | 0.10 | 0.07 | 0.76 | 0.67 | DEthreader | --------SRDSALTLKMIIDEFILGNT----TLQTIEQYIQLQTVSNPSG--T-------FLPDGVGGEPKFGPRAIA----MTYNWIKNG----AKIWIANLSVWGFLWEETNRLDGNSILG----ISTFDIDAYQP-S-GR--DVYMNPWYLITAAFLYDAVAQWKARH---YVETWSYATMQRAGQY--PSSWGS--ALPPSS------- | |||||||||||||
3 | 2ihoA1 | 0.10 | 0.07 | 0.67 | 0.52 | CEthreader | -------------------------------------------------------------------SLRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQNWHQLWLAEPIPNVADTFTLCNLFSGTYMDLGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDG----TSYKIQNYGSKTFVDLVGDSSDGAKIAGWTGTWDEGNPWYFNRM | |||||||||||||
4 | 6mzcG | 0.08 | 0.07 | 0.93 | 0.65 | EigenThreader | MYLELVYNQNEAKSFFEKFHDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISYIDIFDLPSAYQGLTTDDSSLIAGGFADSTVRVGGGGGGGGGKILYGHSGPVYGASFSPD---RNYLLSSSPVWDTQFGYYFVSGGHYVATGSDRTVRLWDGPIHSLPNGR------FLATGATLKGHVCSLRFSRDGEILASGSMDN------TVRLWD | |||||||||||||
5 | 2x2sA | 0.10 | 0.07 | 0.65 | 0.47 | HHpred | ------------------------------------------------------------------GFKGVGTYEIVPYQASLNLNAWEGKLPGAVVRTYTRSDNAKWQVALVAGSG-DSAEYLNHSGYFLTATKE---NHIVSTPQIS-PTDPSARWTIKPATT-YE---VFTINNKVSLGQLTVKYSTHSGADVLSASAKTADNQKWYFDAK | |||||||||||||
6 | 4g9mA | 0.17 | 0.10 | 0.59 | 0.33 | MRFsearch | ------------------------------------------------------------------ISLPAGTYTLKNVSTGTVLDLWREAAEGTAIQGYKSGDNQKWRLKWT----GKGNQVTLQNGTYVGTNSVNVVG-----------STTAVPLDIVAA-------DKGFAIEAADLFVLDLKSNPANETPVIYYNNNATDNQKWKFIDE | |||||||||||||
7 | 4a7kA3 | 0.13 | 0.08 | 0.63 | 0.56 | FFAS-3D | --------------------------------------------------------------------LEPGRYAIRFGHQTASLALQKNDATDGTPVLAGGPSPQAWNISHVPGTDM-YEIAHAKTGSLVCARWPPVKNQRVAGTHSPAAMGLTSRWAVTKNTKGQ--------ITFRLPE--APDHGSAIDAIPVIVQGDSIELSAWSLVPA | |||||||||||||
8 | 4ionA | 0.14 | 0.09 | 0.64 | 0.76 | SPARKS-K | ----------------------------------------------------------------STQVSSGQTYKITNVKAGTVIDLSGEDNKSIIGYPYHSGKNQQWTFNWTG----KAWTLRSASGSYLGIEGTPADGTRLVAVNDPFE------WHIWRDEANEN---AFRIFVPFTNYNLDLSGDTTPGTPVQLWWTWEGLHQTWTIDRP | |||||||||||||
9 | 4g9mA | 0.13 | 0.08 | 0.61 | 0.64 | CNFpred | ------------------------------------------------------------------ISLPAGTYTLKNVSTGTVLDLWRGEAEGTAIQGYKSGDNQKWRLKWT-----NQVTLQNVSGTYVGTASNIQNSVNVVGST------TAVPLDIVAA-------KGFAIEAADRLFVLDLKSNPANETPVIYYNNNATDNQKWKFIDE | |||||||||||||
10 | 3kvnX | 0.11 | 0.08 | 0.71 | 0.67 | DEthreader | PTGNGSTPDPSKLTITGQRLIADYTYSLLSAPWLTLLPEMA---------------R---WQADWENWQWRGFVGGGGQ----RLDFDSQDSA-ASGDGNGY--N-LTLGGSYRIAWRAGVAAGFNSYMGYL------LWAFSARLGYSPFVSA-DY-AR-----------------GA-LQ--------TQ-LFAEYANRRKGDTQQSVSLAL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |