>PF19165 (406 residues) RMVSGPVNVIRLQGNIHGIPKVLYLFMDYHIEIDRQTQCENIFSQDVQKYFANNFYKLNN GTKMFDFFLEIFPTEIAESIYNSDLPEVDNKEMYIEEVVKLFKKLFKYDPNKNVVLINNF IKRIRLHYLDIRDYYKNNIHDRTSNMVSIAKNFMVNDNITSSGLRNIIRLMKTMRAHLED VVNILDSPSNKTSRAKIIKTRNNDRLEMDTLQYLTRKIKEGYKYDDVKKIMNQLLNKSIR NFKMTIDDIDECIKLFTNYANRIDETKGILNKDNNTSYIYVYGLSNYTIRKMIVEIVNKV ESLFDEKLIEFFARFTDIFFLRRFLDKDYITNAITYSGALHSNMYVYVLVNFFDFKVTHI SHSKISDTDKLTKEIKKRSLAEIQELILPREFGQCSSMDHFPKEFL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RMVSGPVNVIRLQGNIHGIPKVLYLFMDYHIEIDRQTQCENIFSQDVQKYFANNFYKLNNGTKMFDFFLEIFPTEIAESIYNSDLPEVDNKEMYIEEVVKLFKKLFKYDPNKNVVLINNFIKRIRLHYLDIRDYYKNNIHDRTSNMVSIAKNFMVNDNITSSGLRNIIRLMKTMRAHLEDVVNILDSPSNKTSRAKIIKTRNNDRLEMDTLQYLTRKIKEGYKYDDVKKIMNQLLNKSIRNFKMTIDDIDECIKLFTNYANRIDETKGILNKDNNTSYIYVYGLSNYTIRKMIVEIVNKVESLFDEKLIEFFARFTDIFFLRRFLDKDYITNAITYSGALHSNMYVYVLVNFFDFKVTHISHSKISDTDKLTKEIKKRSLAEIQELILPREFGQCSSMDHFPKEFL | |||||||||||||||||||
1 | 2vrkA | 0.06 | 0.05 | 0.78 | 0.64 | DisCoVER | ASRVVVNADRVKGT-IN-RNIYGHFSEHLGRCIYEWVGEDSIPNTNGI-R-NDVLEALK-QKIPVLRWPGFADEYHWKDGVGPRRKRVIENNHFGT--H-EF--LCEL------------LGCEPYISGNVGSGTVQESEWVEYIT--FDGESPANWRRENGREKPW--RIKYWG-VGNENWCGGCGANTGLSLHYYTVPGKKGPATWVTLKKALF-DRLVTSKRIDL-IVDEWG--T-----------------------------WYDVEPGTNPGFLYQQN------------------------SIRDALVAGATLHIFHHCDRVRANIAQLVNVLQSTPTYHVFFKVHQDAELLDTWESVEVSVSAS--RA----ADGKIHIASVDIELRGLSLPPSVTV- | |||||||||||||
2 | 6lgaA | 0.08 | 0.05 | 0.60 | 0.67 | DEthreader | -------------WKN----CVLYQIYPRSF---KDSDGD--DLKGIISELK-HFV-DA---GVDAIWMSPIFENFYDIHYE-----Y-GTMEDFEELLDKAHELGL------------------KVLLDFVPNHASNE--------------------SNWVSSAWYLHQVDFDNVKQEMFNIMKFWLD---------------ALPY-L---------------------------------IE-ADPADHEGRYPDD--P-----LSGLT----Q-FESHQL-GYT-IPL-YTKD-LIELYDVVY-WRL-VFSEAFPFNFDFIILLPNWVFGNH-DN-R---R------PGVAVTYQGEMRDG------------YHLYSRDPARTTWLPV-NLKFKNYSIGA | |||||||||||||
3 | 3h9bA1 | 0.09 | 0.06 | 0.62 | 0.56 | CEthreader | -----------------AKKILVTCASPYA------NGSIHLGHMLEHIQADVWVRYQRMHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGF--------------NISYDNYHSTHS----------------------------------------EENRQLSELIYSRLKEN-------GFIKNRTISEHFFFDLPSFSEMLQAWTRSGALEQVANKMQEWFESGLQQWDISRDAPYFGFE-----------------------------------------IPNAPGKYFYVWLDAPIGLMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIFLSLFWPAMLEGSNFRKPSNLFVH---------------------------- | |||||||||||||
4 | 1wdpA | 0.04 | 0.03 | 0.72 | 0.68 | EigenThreader | MLLNY-----VPVYVMLPLGVDGVMVDVWW--GIIELKGPKQYDWRAYR---SLLQLVQECGLTLQAIMSFHQIGESNHDIGVDNEPIFHGRTAIEIYSDYMKSFRENM---SDFLES---GLIIDIEVGLGPAGELR------------------YPSYP------------------------QSQGWEFPGIGEFQCY----DKYLKADFKAAVARAGHPEW--------------------------------------ELPDDAGPESTGFFKSNGTYVTEKGKFFLT-------------WYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSTAGRPIARMLSRH-HAILNFTCLEMRDSEQQVLSGGWREDATAYNQIILNARPQGVNNNGPPKLSMF | |||||||||||||
5 | 6w08A | 0.07 | 0.04 | 0.55 | 0.29 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------PASISAMVLLNSACQGVVETDQGNEHWYAQVEQNLNAVQKLVRQWRLSGNLYFS-NDIMSVLSIANTFKDSNVQILTLFKALET-RFDTAQLQQLTSLILTLQNPIQSLTSNIKRYDEGLNAWARQVEDAHNTLQQTIAIQQEVSIQAEIIATNAQIDLMKQQIAAF--------KTAIANA-----QRKKGIFETIFPFTLGG-------------SLILAGIVEALQSDIQSSLNTINHDQLSQDQQQ-------------------- | |||||||||||||
6 | 6ouaI | 0.10 | 0.07 | 0.72 | 0.58 | MRFsearch | -----------------------------------------DESSSPYEWCIWQLKRCFASSRIIQTFCNLDELTLKKVCGGIPELISGTREFFVKFMASIFMWS---------------------------------FSETCFYVLQMITNWVLDDKLIALGLTLLHDMQSAFISSLDILTQLSKQTKSDYAIQYLIV-----------GPDIMNKVFSS-DDPLLLSAACRYLVATKNKLMQYNKFVRMQNQYIMDLTNYLYRNK-------VLSSKSLFGVSPDFFKQILENLDFKNAKFFTITGIPALSYI-CIIILRRLETAEN--TKIKFTSGIINEETFNNFFRVHHDEIGQHGWIKVNNIHDLRVKILMHPYRDIAAFL------------------- | |||||||||||||
7 | 5h11A | 0.11 | 0.09 | 0.85 | 0.85 | FFAS-3D | -------------------------------------------ENKIQAHVKERLDETRNSDVE--QYLKNLYDALAAKLTDYNLGSSCYLESYIDMERQYLQNRSRYYDSKNHQKRIDTHGE-----TLLSQEVVVNLLQETRHAFERCNKLSDPADLPKNAFSIFLILVEYLVDHIDYALEIGLSAIPSADAKNANLYFLDVVQQANTIFHLFDKQFNDHKLTECLHKKKEVIEQMEVKLDTGIDRLNCMIGQMKYILTT-EQKKTDFKPEDENNVMIQYTTACSKVCAYVGKQVERVRRSMDGKNVDTVLTELGVRFHRLIHEQQFSYS---SMGGMDVAEYRRSALQLFDTALCNLLVVAPDNLKQVGEQLTNLDRNLLHAFVQLRVDYRSARLGRH----- | |||||||||||||
8 | 3zheA | 0.09 | 0.08 | 0.87 | 0.62 | SPARKS-K | ------------QKSDEVTEKFKRYCNQLEKYGQTE-NVHSPVMAMLRRKGRKQLIEIMKRDG--------DCTSSINKFFIRDKEKNMAIAVLLTMFCGELQEMLSL--PDD------KYPALWNMYIDFHRYMPDE-EIQKCLAVGYYSRAIDLDPNQGRAFHVLAGLLNVAQKLRLMILGQLADAPYKKGTEEYLKF-PQKESTDKLMVDFVIWALNEKSKMDYQMTGIKIVNEFKAEIEQKEFDWSLIMSTCRLASKLAMKKFG-----------------FQQFYNCFDTISTLYITIYSRSKCLLAEAISWISDSAEILGHDEQKNEPHFQKNELNDLVMNHINSVFT----SMSLTIISMTSFLLNGPISEPLSQLINYLVVEFPPMEIIHDREESGPL | |||||||||||||
9 | 4hb2C | 0.06 | 0.04 | 0.76 | 0.81 | CNFpred | --------------------------------------------IDTEEIMISKLARQI-NINTLSWAIGSISGTMSED----------TEKRFVVTVIKDLLDLCVKKRGKDNKA------VVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFM--HEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQ-QPQQVHTFYKACGIIISEESVAERNRLLSDLMQLPNMAWDTIV-TVKIIANIIKTNVAVCTSM------------GADFYPQLGHIYYNMLQLYRAVSSMISAQVRGLRTIKKEIKLVETYISKARNLDD---VVKVLVEPLLNAVLEDYMNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQ------------------ | |||||||||||||
10 | 5twvB | 0.04 | 0.03 | 0.62 | 0.67 | DEthreader | ---PHLL---------------------NLRWILTFI-L----LFVLVCEIAEGILSDGVTER--------LADLLGFAGPL----------------C--IF-GIVDH---LGKENVFPFLGAYAVLFLLLLQRTFLQASYYVAIETGINLRGAITKIVAIDTNQLMWFFFL------------------FMNTAIPALVTPLFLLCRSTLLCVSALTIVTVFLVALLPLAVVCYFIQKYFRASRDLQQLDDTTQLPLVSHFAETVEGLTTIRA-FRYEA-R-FQQKLLEYTDSNNIASLFLTAANRWLEVCMEYIGACVVLIAATSIS---------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |