Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KKGCKNQLLLSILRDKLYYISHPSVSNLECSINLSVCEMFSHSAFEDTVQEILTLANFNPKQIELKEKNFTLLFKEVAAIKLLNLIFKDNSDHALYPIYLKWIDGSEWM |
1 | 4yisA | 0.10 | 0.09 | 0.92 | 1.00 | DEthreader | | FIFYPLVT-IDWISGFASDSSFN-VKQLRFGIG-L--NIREKALIQYLVAYFD----LSDNLKNIYFSARFEVVKFSDITKIIPFFDKSIQGKSDYQNFKEVADIIILK |
2 | 4yisA | 0.06 | 0.06 | 0.92 | 1.00 | DEthreader | | EPLVTIPNWIGFASGDS-SF-NVKIVQL-RFGIGLN-IR-EKALIQYLVAYFD----LSDNLKNIYFDSRFEVVKFSDITKIIPFFDKYSIQGKKSQDYQNFKEVADIK |
3 | 4av2A | 0.07 | 0.06 | 0.83 | 0.77 | DisCoVER | | ----TNIDFRGIIELAAFGQPDISQHDHIIVTLKNHT------LPTTLQRSLDVTPVQKV-TLKRLNNDTQLIITT-AGNWEL-VNKSA-APGYFT-FQ--VLFTGRK- |
4 | 1dq3A | 0.11 | 0.10 | 0.88 | 1.00 | DEthreader | | FDLLLIPQILNAVLSIAFDEGHVSNKPG-IELG-M--V-NKR-LIEDVTHYLNAL-GI---KARIREDYVLHVEEYSSLLRFYELIGKNLQ-NEKREKLEKVLSNHK-- |
5 | 2re1B2 | 0.13 | 0.09 | 0.69 | 0.57 | CEthreader | | ----------DDNERAAVTGIAFDKTVCKVSAVGLGRSH---VGVAAKIFRTLAEEGIN-IQISTSEIKVSVLIDYELATRVLHKAFNL-------------------- |
6 | 1p8kZ1 | 0.13 | 0.12 | 0.91 | 0.60 | EigenThreader | | -GSDLTYAYLVGLFEGDGYFSITKYLTYELGIELS-------IKDVQLIYKIKKILGIG--IVSFRKIEVALRIRDKNHLKIFEKYPFSNKQYDYLRFRNALLSGIISL |
7 | 3hyiA | 0.18 | 0.15 | 0.81 | 0.26 | HHpred | | FDVALFVSFLRGLFLSGGSMTNPRYHHLEINLF-------E-EETLALTRKSLKDFNINAGIIEL-RNTRKLYIKSIKDIVFLEAIGVQRK-------LEEIDR----- |
8 | 3hyiA | 0.15 | 0.12 | 0.81 | 0.58 | MRFsearch | | --VALFVSFLRGLFLSGGSMTNPR-YHYHLEINLF-----EEETLALTRKSLKDFFNI-NAGIIELRNTRKLYIKSIDILVFLEAIG-------VQRKLEEIDR----- |
9 | 1r7mA2 | 0.13 | 0.11 | 0.83 | 0.37 | FFAS-3D | | ---TPMSLAYWFMDDGGKWDYNKNSTNKSIVLNTQ---SFTFEEVEYLVKGLRNKFQLN-CYVKINKNKPIIYIDSMSYLIFYNLI----KPYLIPQMMYK-------- |
10 | 2vs8F1 | 0.09 | 0.08 | 0.96 | 0.68 | SPARKS-K | | ---ENVSGISAYLLGLIIGLYKLKYKRSEYRVVITQKSELIKQHIAPLMQFLIDELNVKSKIQIVKGTRYELRVSSKKLYYYFANMLERIRLFNEQIAFIKGLYVAEG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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