Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MRIDGTSQNIKDEFQRIIQESTPLMLSNNYVTDFEVLHCEPVKYDDYHILISIFFAGKPVYMFGIINLSKNQGSLKIYNYYSFENFLFDMTDMVIKNFRNVSFKYQRKLIFNMGKELYDYLVDFNGKIRPISEEMSEDIYNNLIDIDLIEEYICYFKNL |
1 | 6gumA | 0.05 | 0.03 | 0.63 | 0.59 | DisCoVER | | -ARGRLA-----HPHGFV--AKPETGQNLMVWHCTIPGKTDWEGGFFPLTMHFSEYPSKPPKCKFPFFVYPSGTVCLLNEWR---PAITVKQILVGIQ-LDKKRVKLQS--KQY--------------------------------------------- |
2 | 1wygA | 0.05 | 0.04 | 0.86 | 0.83 | DEthreader | | SEIKIEKGDL----------VSGELY--PFLAKYKVGFMKTG-TVVALEVAHFSNGESIMALHMD----KIPNIRGTGRITAFRGGGPQGMLIAEYWMSEAAEEVRRNMYLPPTKF-GI--SFTLPGYSFETNSGN--PFHYFSYGVPLFLASSIFFIA |
3 | 3zyyX2 | 0.08 | 0.08 | 0.93 | 0.39 | CEthreader | | -QHQIVTDDEKASGVMNELDLAEEDELDPGDITSGVLYTGLANSDEITLFIDI----GTNGEMVLGN---KDWLVTCACSAGKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLN---IKDAITIGLLPDIDINKFSYVGNSSLKGARKALLSRKA |
4 | 2qkdA | 0.07 | 0.06 | 0.85 | 0.62 | EigenThreader | | RIDEFIGKLKDLKQMQQAEMLGLEEDLRNEVLQFNTNCPECNAPAQTNMKLVQI-PHFKEVIIMATNCCGHRTNEVKSGGAVE---------PSDMTRAVLGEGLLKDIRELVTK--------NPFTLGDSSNPDQS---EKLQEFSQKLGQIIE---G |
5 | 4i3tA | 0.09 | 0.06 | 0.65 | 0.27 | HHpred | | --------------------------------------------------EPMRIAGRLVDRVEVRYPWNDTVVGTVPA-GRAEHAREAF-AIAAAYQPKLTRYERQKILLATAEALAARK---EEISDVITLELGISKADSLYEVGRAFDVFTLAGQM |
6 | 2d4eC1 | 0.08 | 0.06 | 0.80 | 0.28 | MRFsearch | | ------SWETIEEVRRRLKERP-----------------------ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAV---MECLDAGQVLRIVRAQVARAAENFAFYAEY |
7 | 5v9xA4 | 0.12 | 0.11 | 0.93 | 0.52 | FFAS-3D | | ----GRPAELGAAVGAFTGELASLVPSDTTFV-VERFRDEL---GDWRVILHSPYGLRVHDGIIVRLPDSPGADLFVFDADEIEPIVTAEVGLFASRFRECAARAPLWHQRQRAAQLLDIARKYPDF--PIVLEAVRECLQDVYDVPALIELMHKIAQ- |
8 | 5cwjA | 0.08 | 0.07 | 0.87 | 0.64 | SPARKS-K | | -----DSEEEQERIRRILKEARTEESLRQAIEDVAQLAKKSQDSEVLEEAIRVILSEEALAVAEIAKEAQD------------SEVLEEAIRVILRIAKESGSE---EALRQAIRAVAEIAKEADPRVLEEAIRVIRQIAEESGSRRQAERAEEEIRRR |
9 | 3etuA | 0.11 | 0.09 | 0.82 | 0.55 | CNFpred | | MTSADSQEQVRAKLNTIMKEY-------MNLSRIVS------------MIKNSIFIS--GKEISYENE---KNILVFSKS-CVSTVLTSFEAVCDFMLDGLAFRDRKTLSYELGPLFNTEFTKFVNNASIILESLDSPLKNLVS---VINNKLTRLVAK |
10 | 6ajfA3 | 0.07 | 0.07 | 0.93 | 1.00 | DEthreader | | --FAWWGRTVRVI-VMVALCLGGGI---EAIPVA-VLFVFGT--A--ALPAGAILMAVVIGAYGFIRFEAVTSGVVSAVIIAVIGLSTDYEVFLVSRMEAIGTATTGRLITGAALILAVVAGAFVFSDLVMMKYLAFGLLIALLLTIIRMLVPAVMKGC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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