Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MPVPKSEFDSLPPCDFYTPAELLEADQMYTVYEIARLLQGLEPDAEIDRETEDVLLDWAIPWIMTNADELVVAEPRNDDEPGYYGLA |
1 | 6ni1A1 | 0.04 | 0.02 | 0.55 | 0.70 | DisCoVER | | LNEVI-HY--KDLVTYSPI-TELDTGMSLK-EIS---------------------------EAAIRY-SDNTAGN-----ILQFET- |
2 | 1skfA | 0.05 | 0.05 | 0.85 | 0.83 | DEthreader | | ----AA-VGGYAMGTTAD-T--RRSTGSTT--KIMTAKVLLAAYAADVKSFIGKMNTA-ATN-LGLHN-RDTKSSMKNSRGVVFIGT |
3 | 5dotA3 | 0.09 | 0.09 | 1.00 | 0.67 | CEthreader | | EPVVLTKFVEGAREVEMDAVGKDGRVISHAISEHVEDATLMLPTQTISQGAIEKVKDATRKIAKAISGPFNVQFLVKGNDVLVIECN |
4 | 3t2bA2 | 0.10 | 0.09 | 0.89 | 0.63 | EigenThreader | | --ERPSEPIIAFAADKTEPGAFN--------LPLYKMFADPFTTAGLVIDDAYSLLGLIGTTGSVEGKDDPHGWMRGSRTRFDGPPK |
5 | 3u99A | 0.19 | 0.13 | 0.68 | 0.25 | HHpred | | ----------CGSCHMAYPANLLP------ADKWRAITANLGDNASLDPQVTARIEEY----LVQHAAQ-----PQKITEQAFF--- |
6 | 6t9iI | 0.19 | 0.11 | 0.61 | 0.53 | MRFsearch | | ------------PATTKLPPYEMDTQRVMSKRKLRELVKTVGGETVIDGDVEELLLDLADDFVTN---------------------- |
7 | 3i3nB2 | 0.26 | 0.14 | 0.53 | 0.33 | FFAS-3D | | -------------------HKVIQDEEFLPFHLIRDWLS----DLEITVDSEEVLFETVLKWVQRNAEE------------------ |
8 | 5tyqA1 | 0.17 | 0.15 | 0.86 | 0.64 | SPARKS-K | | -----------IVGGSTIQPERVDAAALRQLGDAMRKVTPVDPDEEVGADGRQALLDSGMP-LRGHQGVVVLSDPDVEEEVQHRWYV |
9 | 5ifeC | 0.20 | 0.10 | 0.53 | 0.46 | CNFpred | | ---------------------------KMVMETIEKIMGNLG-AADIDHKLEEQLIDGILYAFQEQEDSVMLNG------------- |
10 | 3forA2 | 0.10 | 0.09 | 0.91 | 0.83 | DEthreader | | IDVVHELTHVTTAGL-NESGAINEA-ISDIFLWNAYLISQGG----GI--GRDKLGKIFYRALTQYLTSNLRAVATSTSQEVVKAFV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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