Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KFKKMDNKSYSDVTRFLKETTHLTAREWVISRMCADFKNLSNHSEMTWIGENLPELVPFMDEQYSRQEVSNARASFKKKVQRSGTTFFYAYYAGLITQEEMLQIIHQMVKDIKKLMDTEGSEVPEEHATEVQMLVAEVLRNINESLD |
1 | 2l7nA | 0.04 | 0.03 | 0.87 | 0.75 | DisCoVER | | PEMDA-LSVVQLEKDLQEIKAARETMCTQDLGNST-----------KAVSSAIAKLLGEIAQGN-ENYAGIAARDVAGGLRSLAQAARGVAALTSPAVQAIV-LT-ASDVLDKASSLIEAKKRLAQVA-KAVTQALNRCVSCL--P- |
2 | 3jd8A | 0.04 | 0.03 | 0.84 | 0.83 | DEthreader | | GGIGLPLTLIVIEVIPFLVLAEQGETLDQQLGRVLGEV-------FGASVMPAVHTFSLFAGLA-------------M-GIVEFCSHITRAFTVSEALAHMGSSVFSGITLTKFGGIV-VLAF--RMLAMVLLGATHGLIFLPVLLS |
3 | 5cwmA | 0.15 | 0.15 | 0.99 | 0.66 | CEthreader | | ELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRLLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQG--DPEVALRAVELVVRVAELLLRIAGSEEALERALRVAEEAARLAKRVLELAE |
4 | 1ezfB | 0.05 | 0.05 | 0.98 | 0.58 | EigenThreader | | EKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLHYVAGLVGIGLSRLFSASEFED---PLVGEDTERANSMGLFLQKTNIIRDEFWPVQCLNELITNALHDVITYLSRLRNAIPQVMAIATLAACYQVFKEIYHRIP |
5 | 1fehA | 0.15 | 0.14 | 0.95 | 0.31 | HHpred | | LFNMFGVDVTGKIYTALRQLINFGADMMEEAELVQRIEN-NGPFPMFQAENYYPELLNNLSSAKSPQQIFGTKTYYPSISKNVFTVTMERDIDAVITTRELAKMIKDAKIPFAK---LEDSEADPAMYSGAGGVMEAALRSAKD--- |
6 | 5cwmA | 0.13 | 0.11 | 0.81 | 0.38 | MRFsearch | | ------EEALERALRVAEEAARLAKRVVRVAELLLRIAKES----------------------GSEEALERALRVAEEAARLAKRVLELAEKQDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRE |
7 | 6fznA | 0.11 | 0.10 | 0.85 | 0.71 | FFAS-3D | | -----TSEQRVNIATLLTENKKKIVDK-ASQDLWRRH----------------PDLIAPGGIAFSQRDRALCLRDRGWFLHLITFCLLAGGPIESIGLISIREMYNAMMESIRCLKEASLSLLDEEDANETAPYFDYIIKAMSHHHH |
8 | 5cwjA | 0.12 | 0.12 | 0.93 | 0.71 | SPARKS-K | | LKEARKSGTEESLRQAIEDVAQLAVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQD---SEVLEEAIRVILRIAKESGSALRQAIRAVAEIAKEAPRVLEEAIRVIRQIAEESGSE-------EARRQAERAEEEIRRRAQ |
9 | 5xflA | 0.14 | 0.12 | 0.84 | 0.58 | CNFpred | | ----------DKMTKKTRDL-RRQLRKAVMDHISDSFL---------ETNVPLLVLIEAA--SGNEKEVKEYAQVFREHANKLVEVANLACSIS-MAATQIDSLCPQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVD |
10 | 5yfpB | 0.04 | 0.03 | 0.80 | 1.00 | DEthreader | | ------TGKDSEG-K------------G------M-FFTSQSSDITRSNGRGAISKEVKTTLVYPSKQLLTGIEIQQIISMEAVLEAILKNADKDNHTILTLTNLQYFRECAFPNILYFWNLAS--LEFSLLSKMESSIFGNYSD-I |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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