Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ISVQDDTPTVVLSAVVAPSLVVDETNLAADAQASFSGLFTPAYGADGAGTTTYALAVTAAASGLIDVASGQNVVLSLNGTVVEGRTAGSNLLVFTVTVDAAGQVTLDQIRALSHPDATNPNDPVSLAAGLVTLTATITDRDND |
1 | 4p99A2 | 0.17 | 0.10 | 0.57 | 0.48 | DisCoVER | | ----ATAGTVTV--NAITDVINAE--A---AGTVAVSGT-ATGGDIA-EGDTVTLEIN----------------------------------GETYTTTVEWSVDVAG------------SDLAAD--TAFDAVVTSSDVDT- |
2 | 3rirA | 0.06 | 0.04 | 0.76 | 0.83 | DEthreader | | ---------------ALFFSEVY--SDEQSLWMSVVLRPNVAF------SMSKLFIALGIRDAIQFS--QDEVKVKWP---NDIYI-DN-GKVCGFLTEMVIICGIGINTSIQDKNKLDRYQFLRLLQEIERYFLDGY--R-- |
3 | 2yhgA2 | 0.10 | 0.07 | 0.69 | 0.56 | CEthreader | | YSAANHHPVPVVNNDANEAVMYLNASAGS----TVSLDASGSSDPDG-DSLNYSWSHYGEADSYSGS--------------------------VSISNSSSASANVQIPSNAG--------------GKDIHILLTLRDNGSP |
4 | 6h1qA | 0.09 | 0.07 | 0.82 | 0.68 | EigenThreader | | ---------------IADPLVVTGTPITSTWIGETSVHNGFKCEKKQKCWVETLYANATGS---KISG----IYYYEGS-NRYPVYSGVIGYAFGLKDNVDRVSLKGKVVVTDKHLET---GVYNIPYTIANTWSEYGGHKGN |
5 | 5k8gA4 | 0.23 | 0.16 | 0.69 | 0.57 | HHpred | | ------APVAVD-----DQDSIVVQHS----LPSTEGNIFDSLGADGSVTVV-GVAVGAIVSSN--ES---------VGHSIEGQ-------YGNLVLNSDGSYVYDVTASVSDIPAGA----------TESFAYLIQDQDGS |
6 | 5irbA | 0.22 | 0.20 | 0.89 | 0.35 | MRFsearch | | -SMTINGTLYTTVVLKTWSVGVSGSDLAQDNSFQVSVTGQDSAGNPYAGTTTSTHTVDTSADAGTVTVNAGTVAVSGTADTVTLEIN---GETYTTTVDANGEWSVDVAGSD------------LAADTAFDAVVTSSDAAGN |
7 | 6vfuC2 | 0.18 | 0.13 | 0.75 | 0.56 | FFAS-3D | | ---NDNPPVINLLSVNSELVEVSES--------------------APPGYVIALVRVSDRDSG----LNGRVQCRLLGNVPFRLQEYESFSTILVLDREQHDQYNLTIQAR-DGGVPM--------LQSAKSFTVLITDHHHH |
8 | 6beaA1 | 0.11 | 0.10 | 0.91 | 0.77 | SPARKS-K | | VTLNDQDVVINGDN-KITAVTIETSDSDKD--------LNVTF---GGHDITATSTVNQDFVEGVKVSGNKNVVINATDSTITAQGEGTYV-RTAMVIDSTGDVVVNGGNFVAKNEKGSTGNNLTLNGTTINAQGNKSYSNGS |
9 | 6beaA | 0.11 | 0.09 | 0.85 | 0.81 | CNFpred | | NNLTLNGTTINAQGNGSTAIFAQKGNLLQGFDGDATDNITLADSNIINGGIETIVTAG----NKTGIH---TVNLNIKDGSVIGAANNKQTIYASASAQGAGSATQNLNLSVA--------------DSTIYSDVLALSESEN |
10 | 3f83A | 0.09 | 0.07 | 0.74 | 0.83 | DEthreader | | --GGLTKNIQIWLFKSNARVDLNLRPTGTYIGR-NSVDMCFYDGYSNSSSLEIRFQDDNSK-------------SDG----KFY-------LVYTLSLLLAGRLQLDAKVKNPE--A----GQ-Y-M--GNIKITFTPSSTLN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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