Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MANWTDSIVGDRMTVDREFNDRVAASEFSSQEWGLIMTATEFEIEHADDPERARIVADTEKLPQIMPELKNVRSQMAQMGGAPAESSSGGGGGLFDSIKGALGLGGGGGGDDAEKRREAERLVQEYADELQRHLESNGKWERVRVAYQ |
1 | 4yk3A | 0.05 | 0.04 | 0.74 | 0.55 | DisCoVER | | --TREEIADRMQPLVQAYQQEVM--HWCIVYGSDVLKEKMVLQ----------KPSEGEDLSRQVAENPTSVH--K--LAGRNLCGLKTNARRQAE-----------------EGFMHLCQALDGYTSAVTQAQ--ENIKHVPQAEA- |
2 | 6cscA | 0.07 | 0.06 | 0.92 | 0.83 | DEthreader | | MMKGL-IY-ETSFRFWLLVIVWSEMRLYLTIHSDHEGGNAHTHLV----S--ALSSFAMNGLAHGAPGYGHLRKTDPTCQREFAHLDFKLALYPN-VDAHSGVLLQYYGMTMNYYTVLFGVSRALGVLAQLIWSRALG-FP-LER-PK |
3 | 3rwlA2 | 0.08 | 0.06 | 0.78 | 0.49 | CEthreader | | LPVGEEFDWVDRVSIEITTQMLATLFDFPFEERRKLTRWSDVTTAAPGGGVVESWDQRKTELLECAAYFQVLWNER---------VNKDPGNDLISMLAHS---PATRNMTPEEYLGNVLLLIVGGN--------------------- |
4 | 4qlxA | 0.09 | 0.08 | 0.90 | 0.77 | EigenThreader | | RHSVRQFDPNVRDELQKMIAEAA---TAPSACNLQS--WHFVVVDTVMQVDSAAIVFIA-GDTQSHYVYRDVWNKVYEDGN---------ITKERLDQILGTFLPLYENATPDFLKFDATIDCSVVGMQLLLVARAHGYDANAFSGID |
5 | 4flaA | 0.24 | 0.13 | 0.54 | 0.27 | HHpred | | ---------------------------------------------------------LTEELIKALQDLENAAQKIASL--PQ----EVQDVSLLEKITDKEA-----AERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYT |
6 | 3s84A | 0.20 | 0.14 | 0.68 | 0.48 | MRFsearch | | --DTQEKLNHQLEGLTFQMKKNAEEL-------------------------KARISASAEELRQLAPLAEDVRGNLRG---------------NTEGLQKSLAE---LGGHLDQQVEEFRRRVEPYGENFNKALVQQ--MEQLRQKLG |
7 | 5w63A | 0.17 | 0.16 | 0.89 | 0.52 | FFAS-3D | | ----NDQILEVGAVLLKDFYERVHRHTVVSRH--------ELGGSELSDPTHKKL---AQYLQQIGDELDDLQRMLADSALQPTSDGKFNWGRVVALFYFASRLVIELTKIPDIIRTIINWTLDYLREHVINWIREQGGWEGIQTYF- |
8 | 4k0dA | 0.24 | 0.20 | 0.82 | 0.58 | SPARKS-K | | SADAQLELIGPRAAAAASLESAVLHVSLTARAYALT-------------PEPAR-----DALQAALRRLEGAAARFAALPKSP------EGAALSGRILAAVPLGTATGGDDSAIRAREATLPPR--EELLSLLRTFGAQQAHDAGAS |
9 | 5cwbA | 0.20 | 0.18 | 0.87 | 0.55 | CNFpred | | --TSEDEIAEEVAREISEVIRTLKESGSSYEVICECVARIVAEIVEASEDEIAEIVAR--VISEVIRTLKESGSSYEVICEC--------VARIVAEIVEALKRS-------GTSEDEIAEIVARVISEVIRTLKESSSYEVIKECVQ |
10 | 4kghB | 0.10 | 0.07 | 0.78 | 0.83 | DEthreader | | TGSLTNALSNGLLSGLLGILENL-PLLVIKAV-KL--D-ITAEILAVRDKIHLVLGDCT-HS-PG--SL--QI--SL-LD--G-LGPLP--IQ-LLDSLTGIL--------N--KV-LPELVQGNVCPLVNEVLR--GLDITLVHDIM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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