Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MAENRVVQGRMVTPKKLAELIEGESVMDAEPIEDADRECPDCGGDVITVGYMPSVTEFVTGYKCQDCDWSETDR |
1 | 6gykI2 | 0.19 | 0.14 | 0.70 | 0.65 | DisCoVER | | ----ELITNIGE--------------TAGTLP-RSDRECPKCSRENVFFQSQ--QRSMVLFFVCLSCSHIFTS- |
2 | 2nraC | 0.06 | 0.05 | 0.84 | 0.83 | DEthreader | | NFTQQRHNYFIISVDELKEELIAYYKYFKRVLNKAAEIK--KKTEIVGFTVHEISKLKFEFV----VD------ |
3 | 4c2mI | 0.11 | 0.11 | 1.00 | 0.69 | CEthreader | | DCGDLLENPNAVLGSNVECSQCKAIYPKSKDGATIKEKCPQCGNEEMNYHTLQLREGATVFYTCTSCGYKFRTN |
4 | 3h0gU | 0.14 | 0.14 | 0.95 | 0.77 | EigenThreader | | NFQYCI--ECNNML--YPREDKVDRVLRLACLPRSDKECPRCHQHEAVFYQTHGDTMMTLIYVCVHCGFAFEEQ |
5 | 3eswA | 0.20 | 0.19 | 0.96 | 0.38 | HHpred | | -YDNPSWHSITLDLDLIYKNVDKEHAEGENIYTDYKPDCNHCGQNMTPLGSQPNGEESVEIYKCNRCGNITR-- |
6 | 6tc6A | 0.28 | 0.18 | 0.64 | 0.53 | MRFsearch | | -------------KKECALLVETVKAVLQRAIETYNQPCPRCGGLVVKETLGQRGTFYCP-------------- |
7 | 6gykI2 | 0.17 | 0.15 | 0.85 | 0.30 | FFAS-3D | | --RHELITNIGETAGVVQDIGSDPTLPRS------DRECPKCHSRENVFFQSQSMVLF---FVCLSCSFTSDQK |
8 | 3gr5A2 | 0.08 | 0.07 | 0.88 | 0.79 | SPARKS-K | | --SRSIITPTYLDIDSLLKYLSDTISVNKNNVRKITTF------NSIEVRGVPECIKYITSLSESLDKEAQSK- |
9 | 4wcxA | 0.18 | 0.15 | 0.84 | 0.60 | CNFpred | | -----------ITPEEAAVLLNVEDEDLLNEMFKVARYKEEIYGNRIVIFAPLYVS-NYCVNNCRYCGYRHSNE |
10 | 2v7yA | 0.02 | 0.01 | 0.86 | 0.83 | DEthreader | | TPLSLGIETTKLIETTIPTS-----K--S--QV-FTTQTTGIPPQIEVTFDIDANGIVHVRAKDLTNKEQSITI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|