>PF19096 (327 residues) ARPLRFRHAPGRWTVGRVRNDVFQPLDGNLGAEMTAPWFRSPDGYDARRFEMDNGDIALF AWNDDEAYWLGNTETPSSLWRTEKYGFSEVPYPIARWAERELLAQLHEESPWLEPYPHVS WFFLPVFLSKDGRHTTREFFHDHAAGFPDATRDEALDFYERFLHTGALDEYRELMAGKLG TSERIDLVRMAASMGEFNVAKVLHDAGYDLTPEIEVTTGHSLDYRADRNGDGGTLVEVTR PLPPNKRSANTPVAAVRDTAETKTNGQLEHHAGGVTLFVDCSSFPDDDWFAVRGEQPEVR HRPAVVFRARPDGHIEGYSKGSVPLDL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ARPLRFRHAPGRWTVGRVRNDVFQPLDGNLGAEMTAPWFRSPDGYDARRFEMDNGDIALFAWNDDEAYWLGNTETPSSLWRTEKYGFSEVPYPIARWAERELLAQLHEESPWLEPYPHVSWFFLPVFLSKDGRHTTREFFHDHAAGFPDATRDEALDFYERFLHTGALDEYRELMAGKLGTSERIDLVRMAASMGEFNVAKVLHDAGYDLTPEIEVTTGHSLDYRADRNGDGGTLVEVTRPLPPNKRSANTPVAAVRDTAETKTNGQLEHHAGGVTLFVDCSSFPDDDWFAVRGEQPEVRHRPAVVFRARPDGHIEGYSKGSVPLDL | |||||||||||||||||||
1 | 4g6vA | 0.16 | 0.06 | 0.37 | 0.78 | DisCoVER | --SL---------------------------------------------------------------------------SG--K-----------------------------------------------------------------------------P------------TQIPPLS-------TTRSLIRENQSAVTLANKGYDVVQNPEVLGPKNPDYTIN-----GQVFDNYAPATG------NVRNIATTISNKVSSGQA------SNIVVNLADSSA-SPAAIEAQ-IIPGLGKVIVIDK-----GNITIIK------ | |||||||||||||
2 | 4z0vA | 0.04 | 0.03 | 0.69 | 0.83 | DEthreader | -------------------PPAF--T---E-------------------LQ---LPR-----------VCPKL-SLEFGDPASSL-R---TDVEERVYTPLKLESVCVV-E-AGPGTCF---------------LADTYAQTFSRLY-YCALYRQNLIQKELTGYNALEGLEGVF--R--IKQ-HE--G--LA--TF--YR------SKFSLSQHDISVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDF-NSTPS-TGMYHFINGTHFFKLKSAEYTNYVCLDYIFIDLALKWK | |||||||||||||
3 | 4g6vA | 0.17 | 0.07 | 0.40 | 0.64 | CEthreader | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSLSGKPTQIPPLSDEVTTRSLIRENQSAVTLANKGYDVVQNPEVLGPKNPDYTIN-----GQVFDNYAPATGN-------VRNIATTISNKVSSG-----QASNIVVNLADSSASPAAIEAQINSYPIPGLGKVIVIDKLGNITIIKP------- | |||||||||||||
4 | 1pixA | 0.07 | 0.05 | 0.79 | 0.68 | EigenThreader | GK-------AGELTALQRIEKLVEP----GSWRLNTLFNPSVAIVKGLGRVNG---KCVVVASDNKK---------------LAGAWVPGQAECLLRASDTAKTLHVYPNRRGGGTPFFRNAELNQLGIPLPKYDPEFFR-----VDDPKAP-------------AFPADDLYSMVPLNDKRAYD-------------IYNVIARLFDNSELHEYKKGYGTGLAKVN-----GLLVGVVAYPEYKAAGSVGIGGQGLVKMNEFVTLCARD--RLPIVWIQDTTAELLGLGQSLIYSIQTSHIPQFEITLAA--AHYVLGGPQGNDTN | |||||||||||||
5 | 4g6vA | 0.22 | 0.08 | 0.38 | 0.52 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPTQIPPLSDEVTTRSLIRENQSAVTLANKGYDVVQNPEVLGPKNPDYTING-----QVFDNYAPATGN-------VRNIATTISNKVSGQ----ASNIVVNLADSSASPAAIEAQINSYPIPGLGKVIVI--DKLGNITIIK-------- | |||||||||||||
6 | 4g6vA | 0.20 | 0.07 | 0.36 | 0.32 | MRFsearch | ---------------------------------------------------------------------------PTQI------------------------------------------------------------------------------------------------------PPLSDEVTTRSLIRENQSAVTLANKGYDVVQNPEVLGPKNPDYTIN-----GQVFDNYAPAT-------GNVRNIATTISNK---------QASNIVVNLADASPAAIEAQINSYPIPGLGKVIVIDK--LGNITIIK-------- | |||||||||||||
7 | 4g6vA | 0.19 | 0.07 | 0.38 | 0.49 | FFAS-3D | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKPTQIPPLSDEVTTRSLIRENQSAVTLANKGYDVVQNPEVLGPKNPDYTIN-----GQVFDNYAPATGNVRN---IATTISNKVSSGQASN-------IVVNLADSSASPAAIEAQINSYPIPGLGKVIVI--DKLGNIT----------- | |||||||||||||
8 | 4gxtA | 0.11 | 0.09 | 0.89 | 0.58 | SPARKS-K | ----KTYIKRLNWEE-SIYLAINKLIAKHGKDNEAY----NPDNKPFAVFDWDNTSIILLYYVRNVSF-----KDPEEFYELIRKNVQRVNIDLISQDIKRAYEKLYKNLDRFEGTDYYQEFVSKLYRYRASEFD-----PEAEDPYCWSKTEEVYDLCKGAYASERIRVEEFVSPDIKSEAGRIEVDLYRSLEEIDIVRAFATDTNNNYKKE-----EKVLGLRLKDDEGKIL------PKFDKDFPIEGKVQTINKLIKSDGDFALKEFHTDLSLIIHRA--NSGLIDDLRQEGSL---RYYSQGRNLLEASFVPSNKSEGYNE- | |||||||||||||
9 | 6fijA | 0.14 | 0.08 | 0.60 | 0.65 | CNFpred | ------------------------------------------------------------------------------------------------QIRSSLQEQLDRRVERSIPHPPNGPSFVLAFTGQGSAFMGVDLYKRFA------SFRSDIARYDQICEGMSLPSIKAMFEDEKVFSASPTLQQLTHVCFQMALYRLWKSL--GVQAKAVV--GHSLGEYAA-----LYAAGVLSQS--------DTLYLVGRRAQLM--EKHLSQGTHAMLAVRA---KEEAIVAAIDGPP--GEAYEFSCRNGEQRNVLGGTVA------ | |||||||||||||
10 | 5xjcY | 0.06 | 0.05 | 0.82 | 0.83 | DEthreader | ------EGRQINMINIEWKKHAFQMILEQRSLIYLKLVAVHDN-QILIVIGTGSGKTTTLAGYTSRGKIGCAVSEEFGCCQEETVKLEIDDLTQYAII--MLD--EA--HERTIHTDVLFGL--V-SASSQIAETSLDPGFVKQKVQVVTINVPEIQRTNLASTVLSLKA-----------------------------AMEQLYTLGAGMEFPL-----LCKMLIMS--VHLGSMIVLSVQNVFYRPLADKAFHDLTLLAVYNSKRLDVVSCRVAICGFN----VYIHPSSALFNRQ----WVVYHELVLTKEYMRVTTIDWLVFA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |