>PF19052 (448 residues) ESDDFKIFVRRLPTFYALNTSAIHHFWKIDSSIQHRYKQLESSTTLLLNRAQRIVNRLFS LSKRCRSQPKVVVPRERSLNYWLNHIQSILYCSENNQIGTFSEETKSCSCTYDHPTCQGI IPCTVGDGPHCASCSYENRTRCGSCNSGYMLSQGLCRHEVPDSTDHYIGFETDLQDLELK YLLQKRDSRIAVHAIFISNDMRLNNWFDPTWRKRMLLTLKSNKYKSNHVHMLLGLSVQIC LTKNSTLEPMLSVYINPFGGSHSESWFMPINQNNYPDWERTKLDIPLDCYNWTLTLGNKW KTFFETVHIYLRSRIKSAPLHGNDTTYYEPLEFMDPSQNLGYMKINSLQVFGYSMHFDPE AIQDLILQLDYPYTQGSQDSALLQLVEIRDRVNRLSPPGQQQLDLFSCLLRHRLKLSTSE VVRILAALQAFSAKQPIPVEYETTKLCS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ESDDFKIFVRRLPTFYALNTSAIHHFWKIDSSIQHRYKQLESSTTLLLNRAQRIVNRLFSLSKRCRSQPKVVVPRERSLNYWLNHIQSILYCSENNQIGTFSEETKSCSCTYDHPTCQGIIPCTVGDGPHCASCSYENRTRCGSCNSGYMLSQGLCRHEVPDSTDHYIGFETDLQDLELKYLLQKRDSRIAVHAIFISNDMRLNNWFDPTWRKRMLLTLKSNKYKSNHVHMLLGLSVQICLTKNSTLEPMLSVYINPFGGSHSESWFMPINQNNYPDWERTKLDIPLDCYNWTLTLGNKWKTFFETVHIYLRSRIKSAPLHGNDTTYYEPLEFMDPSQNLGYMKINSLQVFGYSMHFDPEAIQDLILQLDYPYTQGSQDSALLQLVEIRDRVNRLSPPGQQQLDLFSCLLRHRLKLSTSEVVRILAALQAFSAKQPIPVEYETTKLCS | |||||||||||||||||||
1 | 1hr6D | 0.05 | 0.03 | 0.64 | 0.71 | DisCoVER | ----P--GTRTSK----PNGLTI--AT-----E--YI--PNTSSATVGIFV--DA--GSRAENVKN-NGTAHFLE------------HLAFKGTGSHLNAYTSRENTVYYAKSLQEDI-------------PKAV----DILSDILTKSVLNSAIERTILGNIILYINYKGDRMVLAGAGAVDH----YFGHVPKSESPVPLG--SPLP-VFCRGERFI----KENTLPTTHIAIALEGVSWS-APDYFVALATQAI-----VGNWDRGT----GTPSPLAAASSLANSYMSFSTS---YADSGLWGMYIVTDSNEH------NVRLIVEILKEWIEVRAKTTGRLPVSMVALGNTS--------------------T------V------------------PNVSYI---------------------------------EEKLN- | |||||||||||||
2 | 3c68A | 0.04 | 0.03 | 0.62 | 0.67 | DEthreader | L-R--EYLKKGL--------------------TNPDATPEQTRVAV--KAIETLNGNWRS-PG-G-AVKFNTVTPSVT-GR-WFSGNQTWPWAVFSWQI------------V--------DLIAWN--LSPERGG-----DGGNW-----NERNTKS-ASVWVMYLVYH-----------------------EYGATHFTVKVGYSLEIPAVAASWESG---------------AVFGTVKF----A-EN------------------R--SQDGT-----------------LLGY-----SLLQESVDASYSNHAETIGPEEARYLAQQL-YIEDKP--AGKIERGGPESPFNGAAQANADAVVKVMLDPKEFNTFVPLGTARVWVDQFWF-G----------L--KG-----ER-GYRDDALKLADTFFRHAKGTADGPISAAHL | |||||||||||||
3 | 6bllA | 0.07 | 0.07 | 1.00 | 0.61 | CEthreader | LVFLVKNFPVGQRVLVDSPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDGNLKVRFKKVPHNINFRGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLAIDGPVDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPKVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMDVLTKNKFKVLYEKEQKGPVTHCNGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVKNFILAADVMKSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEAKESFGLRRADFHVGAHVNTFWRTPCRWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR | |||||||||||||
4 | 6gmhQ | 0.04 | 0.04 | 0.83 | 0.60 | EigenThreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GVEAMQ-----------------AESCYQLARSFHVQEDYDQAFQYYYQATQFAS-----------------SSFVLPFFGLGQMYIYRG---DKENASQCFEKVLKAY-----PNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQIL | |||||||||||||
5 | 3fl7A | 0.18 | 0.10 | 0.53 | 0.42 | HHpred | ---------------------------------------------------------LATVAGTCVDHAVVPPEEPR------------MHCAVDGEWLV---PIGQCLCQAGYDACQ---ACSPGSESPCLECPEHGATSCE-CEEGFFRASMPCTPSAPHYLTAVG-MGATPPDSG-----GREDIVYSVTCEQCWPSGEASVRYSEPPTSVTVSDLEPHMNYTFTVEARNGVFRTASVSINQTEPPKVRLEGR--STSLSVSWSIPPPQQSRWKYEVTYRKK-----------SNS----YNV----RRT----EG---F-SV-----TLDDLAPDTTYL----VQVQAGSKVH------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1vt4I | 0.14 | 0.08 | 0.58 | 0.38 | MRFsearch | --DILSVFEDAFMPKSILSKEEIDHIIMVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS-----PIKTEQIEQRDRLYNDNQVFAKYNVS-RLQPYL-------------------------------------------------------------------------KLRQALLELRPAKNVLIDGVLG--------------SGKTWVALD----------VCLSYKVQCKMD-----FKIFWLNLKN-----------------YENCLLVLLNVQNLSCKILLTTRFKFLSAATTTHISLDH---------------------------------------HSMTLTPDEVKSLLLKYLREVLTTNPRRLSIIAESIRDGWKHV------NCDKLTTIIESSLNLEPAEYRKMFDRLSVF----------------- | |||||||||||||
7 | 5ijnC | 0.12 | 0.12 | 0.95 | 0.54 | FFAS-3D | LQPNLVDLCASVAELDDKSISDMWTMVKQMTDVLVRMEFVRQALAYLEQSYKNYTLVTFLNIKLPAPLPGLQDGEVEGHPVW-ALIYYCMRCGDLLAASQVVNRAQH-----QLGEFKTWFQEYMNSKDRRLSPATENKRALRNNTDPYKRAVGRCDSEVADKTEDYLWLKLTLSQFQKQLLEDYTVPFLYFQVLFLTAQ----------FEAAVAFLFRMERLRCHAVHVALVLFELLLLKCLRRLNRLLMLYTRKFESTDPREALQYLENDGSRKPNKGLFEEAAKLYD----LAKNADKVLELMNKLLSPVVPQISAPQSNKYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLPLNQESVEERVAAFRNFSDEIRHNLS--EVLLATMNILFTQFKRLRDSQLRSQARTLITFAGRTSGDTNARLVQM-- | |||||||||||||
8 | 6w5cA | 0.11 | 0.10 | 0.91 | 0.71 | SPARKS-K | FGKIVEGFFDSVLHPHHIGESNIKTLWEDLNAIHSKYEEDIARIKVYQGDVCQTINTYCEEVGKEAKTPLVQLLRDIAVDKIIDGITFLSKKHQKYPSFNFGNNSKKIISPCNRNQVDNEIKVLNTKTMR----WEKHHYALSSTEEVYYPATSEGKPALSEQIEQIRSALRKVKKRQMRLEAARQQNLLPFNINICKRGNNFE----------VTLATKVKKKKEKNYKVVLGYDA------NIVRKNTYAAIEAHANGDGVNDLPVKPIESGFVTVESQVRDKSYDQLSYNGVKLLYCKPHVESRRSFLEKYNMKDFEAIADD---------------------ETSLYYFNMKYCREEIFELLRDGKLSVLKLSSNLSFVMFKVAKSLIGTYPPITDEDFALRLALEEKRLNKKEVIANKIVAKALELRDKYGNISDTTKKGKKS | |||||||||||||
9 | 3h5qA | 0.10 | 0.07 | 0.69 | 0.69 | CNFpred | NAMRMIDIIEKKRDGHTLTTEEINFFIGGYDYQASSLAMAIYFQDMNDDERVALTMAMVNSGDMID-GVKVDKHSTGGVGDTTTLVLAPLVAA-----------------------VDVPVAKMSGRG---------LGHTGGTI---DKLE-------------AIDGFHVEIDEATFVKLVNEN------KVAVVGQ----SGNLTPAD--KKLYALRDVTGTVNSIPLIASSIMSKKIAAG---ADAIVLDVKTGS--------------------------------GAFMKTLEDAEALAHAMVRIGNNV-----------------------RNTMAIISDMNQPLGRAIGNALELQEAIDTLK-----GQGPKDLTELVLTLGSQMVVLANKAETLEEARALLIEAIN-SGAALEKFKTFIKNQGG--------------- | |||||||||||||
10 | 4f91B | 0.03 | 0.02 | 0.68 | 0.67 | DEthreader | ACMLREIGKHINMD------------------VRLIGATFLRVD--E-NVQNAKDAVNDQL----DKKTGNFQVTLGVYLAIFEIVLNRGWAQ---DKTLNLCK----KLELSV--------TLKVELTITP---------WILVEDVLHHLITFFVPVFEPLLPEKYPP--PTELLIQTQVFTVNSDDNVFVGAPT----------------GSGKTICAYIFVVCSALSSSLSPLLHIQPVYHAITHVIVFV-----------T-TAVGYLERRVASRS-----IIMDTQY----------YDVLQMVGHANR--Q--------GRC-------------K-FLYEPLPVESHLD--------AEIVTKT-------IENKQDAVDYLTTFLYMYYNL--QT--DL--CI--APLNLGMIAAYTIELFSMSISNAAEYKAIRL-QA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |