>PF19014 (187 residues) KHNEILAQQLVNYGFDGVENNLTARQIAMVRAPQTRKQMLVQRRSGSDMCAGDGGRSKTY LIDNIALALDEIHKEVRNKVKPLLDYYRDLFYLQLHFSIVLGQVCNYCMPIVTENIGLIE RVFFWSERPEFELIRKASDISDRLKEIYTRTQQIYHILSESVRFLQSKVDLQKSLEARFH ERSDEQQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | KHNEILAQQLVNYGFDGVENNLTARQIAMVRAPQTRKQMLVQRRSGSDMCAGDGGRSKTYLIDNIALALDEIHKEVRNKVKPLLDYYRDLFYLQLHFSIVLGQVCNYCMPIVTENIGLIERVFFWSERPEFELIRKASDISDRLKEIYTRTQQIYHILSESVRFLQSKVDLQKSLEARFHERSDEQQ | |||||||||||||||||||
1 | 2i1kA | 0.09 | 0.09 | 0.90 | 1.00 | DEthreader | LQEITLKLFYLQ--VKNAILS--------YA-Q--AR-HGD-HNP-AVHGPGFLANDRLAARERAEKKQQEYQDRLRQMQEEMERSQANLLEAQDMILRLEEQLRQLQAAKEELEQRQNELQAMMQRLELEDEIRAKQEEVSRIQQEVELKDSETRRLQEEVEDARRKQDEAAAALLAATTPQHH-- | |||||||||||||
2 | 4ux3A | 0.07 | 0.06 | 0.88 | 0.52 | DisCoVER | -YI--KR--VI--IKGFKTYRNETIIDNFSPHQNVIRFVLKREERQGLIHQGSGGSVMSASVE--I--VIGFSMNN--PY--NIVPQGKIVALT-DKERLL-EDVVKVSENFEVFERLVRGTAKLIIHSISVSFNSKQEQL-HVEGGQKTVCAIALILAIQDPASFYLFDEIDAALNAQFICT---- | |||||||||||||
3 | 2ww9A | 0.07 | 0.05 | 0.77 | 0.83 | DEthreader | IFGLIYLFA--P------I-FLR-GVFG--------------------PNSSLFSLTKATASGAMIINTVVATLVTVLAAIIVCYLQSLLYTGCLSVLFSYTILFYALAPLTFISAFILVTGIWFA-D--KWQAISGSSAIPAVTGASVLSLITVIGESGAAGIVVGIAGGFSLLET---------- | |||||||||||||
4 | 5c1fA | 0.08 | 0.08 | 0.96 | 0.57 | CEthreader | HINEELRSFYHERANIEEDYAKRMAKLSRTTFTGCLKESVQVMKAEVDNMAKSHLQISQLLQDDVENAFTRYAASLKDKKKMIVSGIEKVHKDKLSKHQALVKAQDKYHYLCKKVNYYVSQQNMLF-------GKELEKNNAKLNKTQNAITASSSDYQSAVAAVRDSYARWTNEWRSTCDKLQDIE | |||||||||||||
5 | 6gy6B | 0.05 | 0.05 | 1.00 | 0.72 | EigenThreader | QAVNTIWLLAQRQTSINDKVKRISAYSREFDEMMRDSLAQTLERNNLIQNLSKHIDNVIVSFTGRTSKLTNKISDTESQKTELQSDIDPKTEKRNKLDADREKIIESQDVIRQNNIADMFKDFIPAIKQAIKQGAEIARKILGKVSEGLKYIDLADARMKLSDQIDQLITETDELKAKIREVELRLS | |||||||||||||
6 | 5kh1A2 | 0.15 | 0.12 | 0.78 | 0.27 | HHpred | --SAFLDRLSDTVSARNT-SGFREQVAKLSASAELRQQSFAVAADATESCE-DR---VALTWNNLRKTLHQASEGFDNDTGALLSLGREMFRLEILEDIARDKVRT--LHFVDEQTMLAEKL-QLSTAVKEMRFYGVSGVTNDLRTAEAMVRSRE-------------------------------- | |||||||||||||
7 | 5vjsA | 0.12 | 0.10 | 0.82 | 0.42 | MRFsearch | --PELRQEHQQ--------------------LAQEFQQLLQEIQQ-----------LGRELLKGELQGIKQLREASEKARNPEKKSVLQKILEHIELLETLQQTGQEAQQLLQELQQTGQELWQLGGSGGPELRQKHQQLAQKIQQLLQKHQQLGAKILELRELLKGELQGIKQYRELQQLGQKAQQ | |||||||||||||
8 | 1fewA | 0.12 | 0.11 | 0.90 | 0.75 | FFAS-3D | --SEALMRRAVSLVTDSTSTFLSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMNSEEEDEVWQVIIGARAEMTSKHQEYLKL-ETTWMTAVGLSEMAAEAAYQT----------------GADQASITARNHIQLVKLQVEEVHQLSRKAETKLAEAIEELKQKTQEEGEERAESEQEAYLRE | |||||||||||||
9 | 6w2vA | 0.07 | 0.06 | 0.97 | 0.68 | SPARKS-K | TDKEEVIEIVKELAELAKQSTDPNLVAEVVRATELIREIIKVLLELASKL--RDPQAVLEALQAVAELARELAEKTGPIAKECAEAVSAAAEAVKKAADLLKRAAQAALELAKAAAAVLIACLLALDYPKSD---IAKKCIKAASEAAEEASKAAEEAQRARDEIKEASQKAEEVKERCERAQEHPN | |||||||||||||
10 | 1t72A | 0.13 | 0.11 | 0.86 | 0.62 | CNFpred | KELEETKEQVIKM------------AKLVQEAIDKATEALNKQ--------------NVELAEEVIDTIDLLEVDIERRCIRMIALYQ-PEAGDLRMIMGIYKIVSDLERMGDEAENIAERAILLAEEPPLKPYVNINFMSEIVKEMVNDSVISTLLAKKVIEKDDTVDELYHQLERELMTYVLEDP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |