Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | ECQLRKVIKDKKKENYTVDEAKNIYHSVQESKSGFPIYMASIYPEKVTFKPTEKGKKMRPVEYTTIGQIIQIPEDLQSFLLHVPKSKKAKSFTALFAWLDPQMSKRFEKIVHQAN |
1 | 6f24A | 0.08 | 0.06 | 0.79 | 1.00 | DEthreader | | -------------IKKIQQYRKTLT--KI-V----ETVKVTCSGKMLEWYKGKSDGKIGSFPLNKITSIRTKVDNLKSLEISVSS----VHISTYLFTFREERESWQNNLESFRI |
2 | 4dx8A | 0.07 | 0.05 | 0.78 | 1.00 | DEthreader | | -KYVGA--GL-EGP------------------PEEEFIMGVSK--YGIKVSTSDQYDLHRHALYLIIRMVCYDDGKSLLALKTTDASN-EEYSLWVYQCNSEQAQAICKVLSTAD |
3 | 3so6A | 0.12 | 0.11 | 0.90 | 0.39 | HHpred | | ---------RPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQQN-ESLECHAFLCKRKVAQAVTLTVAQA- |
4 | 2m38A | 0.22 | 0.20 | 0.92 | 0.71 | DisCoVER | | KAAYLGSMLI--KELSTQDACAKMRANCQKSMKKVPTIILSVSAKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNL--AAEII----- |
5 | 3so6A | 0.12 | 0.10 | 0.89 | 0.62 | MRFsearch | | -------------EELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQQNESLECHAFLCTKRKVAQAVTLTVAQAF |
6 | 3so6A | 0.11 | 0.11 | 1.00 | 1.03 | SPARKS-K | | KYLGMTLVERPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQQNESLECHAFLCTKRKVAQAVTLTVAQAF |
7 | 6bcbA | 0.06 | 0.06 | 0.95 | 0.63 | MAPalign | | --RLKEIAAKRKEDMLQQRQLHLEGALCWKSSGRLKDVLAVLLTDVLLLLQEKDQKYVFAISLQKLI-VREVANEEKAMFLISA---MQGPEMYEMYTSSKEDRNIWMAHIRRAV |
8 | 2m38A | 0.17 | 0.17 | 1.00 | 0.62 | CEthreader | | DYKAAYLGSMLIKELRGTESTQDACAKMRANCQKSPTIILSVSAKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAAEIILTLGQAF |
9 | 3so6A | 0.12 | 0.12 | 0.99 | 0.60 | MUSTER | | VFSLK-LVERPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQQNESLECHAFLCTKRKVAQAVTLTVAQAF |
10 | 7bulA1 | 0.14 | 0.11 | 0.83 | 0.53 | HHsearch | | -------------MATSSEEVLLIVKKVRQKKQ---DGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGKAKIQLQLVLH----AGDTTNFHFNESERDAVKDLLQQLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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