Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | GECEEYMNMFASGKNSTEQENTEDQEEDTLNNTDMTRPKRPYYCQKAQKFRTSWRTQSVETPSNVIDHGLAQDRSLTMVESQSDSESKSTGHGTGQERNAQVKVYLTRGSRNPVKTILVNHNANIVAANTDRLRARRQRTFLNRNQWRSVQLSPSHDPEMDRRAGERSYNASLCDSRESYVGHRFNRK |
1 | 3zxaC2 | 0.05 | 0.03 | 0.55 | 0.62 | DisCoVER | | ----SAQIGDFAG-----------------------KDGPRLVSW----------SKTK-----GTAGWEH--DCHFLGTGN---FSLT---LFY-EKAPVSGLENAD-----ASDFSVLGEAA-AGSVQW--AG-VK--VA---ERGQGVKMVTTE--E-------QPKG--KWQA--LR------- |
2 | 4z0vA | 0.05 | 0.03 | 0.66 | 0.83 | DEthreader | | -----------------------------------------TVSYICLQ-FLEGVFRIKQH----------EGLATQHDIEASDLHKELEKLVLYQ-VLRSSVLQVSVLQSKRICVANTHLYGGIRLIQMAVALAHIRHVSCDLYIPVIFCGDFNSTAYTNYLPHPSHIA--LVCD-LK--WK----- |
3 | 2ge3D | 0.05 | 0.04 | 0.76 | 0.52 | CEthreader | | ----------------------------TVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDIENDHPQFVAIA--------DGDVIGWCDIRRQDRATRAHCGTLGGILPAYRNKLGARLRRTLDAAHEFGLHRIELSVHADRARDAVSIDGHYIDSLNAIIFGN---------- |
4 | 3ngnA | 0.07 | 0.06 | 0.94 | 0.67 | EigenThreader | | PWITLKMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDPALKECAIFFEK----------FTLVQ-KHTVEFNQVAMANSDGSEAMLNRVMIGVAVVLEKELFKQLANAHMHWSDVKLIQTMMFVSEVKNILEKASIVLCADLSLPDSGVVEYLSNHKDFIDYIFYKTLVENNITGCPH |
5 | 3kh0B | 0.14 | 0.05 | 0.37 | 0.31 | HHpred | | ---------------------------------------------------------------------------------------LYFQGNQQVGDCCIIRVSLDVDNGNMYKSILVTSQDKAPAV----IRKAMDKHNEEPEDYELLQILSDD-RKPEN-------------------------- |
6 | 2pffB | 0.09 | 0.03 | 0.35 | 0.60 | MRFsearch | | -------------------------------------------------------------------------KATHILDFGPGGA-------------SGLGVLTHRNKDTGVRVIVAGTDLYKTSKAAQDVWNRADNHFKDTYGFSILD------------------------------------- |
7 | 2idlB | 0.13 | 0.06 | 0.45 | 0.40 | FFAS-3D | | --------------------------------------------------------------------------------------------------NAMIQAVFERAEDGELRSAEITGHADVVCASVSTLAINFINSIEDEGGYLMVEIPKDLPSHQREMTQLESFFLGMANLSENYSEF----- |
8 | 7abhE1 | 0.10 | 0.09 | 0.86 | 0.63 | SPARKS-K | | SEFGNHYLYQIAHLGDDDEEPEFSSAMPLEDTFFFQPRPL-----------KNLVVDELDSLSPILFCQIAEDTPQLYVACGRGPRSRHGFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAA---------GELAAEMAAAFLNENLPES------IFGAPKAGNG |
9 | 1a6dB | 0.15 | 0.06 | 0.42 | 0.60 | CNFpred | | ---------------------------------------------DMDKLAKATGASIVSTIDEISDLGTAERVEQVKVGE-------------------DYMTFVTGCKNPKAVSILVRGEEHVVDEMERSITDSLHVVASA--------------------------------------------- |
10 | 5z87A1 | 0.06 | 0.04 | 0.74 | 0.83 | DEthreader | | DRSLPRAA------TLDEMAAQHGRSRFGI------------------------VTAKAEGGLPAN----RI-ATSVKFAGYGQGIG-------R-NFAPSVLPFRAI---AGSIGLMASH-GEIDGVPAHADTHLLNDVRDDWGFEGYVVSDDDVRRHVASEEAAIGLVDIERIAAKFKCGLFDMP- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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