>PF18991 (346 residues) AYDEGIIDTDEMYKELMGRQSSGDNIRQITTPEGEGYRGNQHLKSFPFMKEFEHTVVERI LDIELKRGDLPTEVSSLASKIVRYEGMTHFVDILVGMNSETFVRGYNYISENPTKKEIFS HLLKVCYPKQDEDEKLLKKLLKGRSISEKRLLEAAMYAPQWIDIVEKYLGWKGLRSAAWY FQAHVNEGFSAQKETIVAHYSPIVPADFNDGAFDTDWFNDAYKTLGKKRFELLYEAAKYI SGGANHRRSQLFADAVLGKLKLTDMKKSIKEKRNKDHLLCYSLIPIKKDKLKETLRRYEC IQEFLKESKQFGAQRRESEAKTAAIALGNLARNAGYSDVTRLTWNM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | AYDEGIIDTDEMYKELMGRQSSGDNIRQITTPEGEGYRGNQHLKSFPFMKEFEHTVVERILDIELKRGDLPTEVSSLASKIVRYEGMTHFVDILVGMNSETFVRGYNYISENPTKKEIFSHLLKVCYPKQDEDEKLLKKLLKGRSISEKRLLEAAMYAPQWIDIVEKYLGWKGLRSAAWYFQAHVNEGFSAQKETIVAHYSPIVPADFNDGAFDTDWFNDAYKTLGKKRFELLYEAAKYISGGANHRRSQLFADAVLGKLKLTDMKKSIKEKRNKDHLLCYSLIPIKKDKLKETLRRYECIQEFLKESKQFGAQRRESEAKTAAIALGNLARNAGYSDVTRLTWNM | |||||||||||||||||||
1 | 3opbA | 0.07 | 0.06 | 0.96 | 1.00 | EigenThreader | KRVFEEQDLQFTKELLRLLSSACIDETMRTYITENYLQLLERSLNVEDVQIYSALVLVKTWEIFINAISRRIKVEMSVEALAYLSLESFTEILLTMIKSQKMTH----------CLYGLLVIMANLSTLPEEGGILLFNEKYILRTEPNCKQQVVRIIYNITRKIILEYLANKGRILGCRALTRMLIFTNPGLIFFLFELLPRSTDNYEALLALTNLASSDGEEVCKHIVSTYWSTIENLMLDENSTLELISNMMSHPLTIANILVKLLQLESQRAVAAIFANIATTIPLIAKELLLIENAIQVFADQ----IDD-IELRQRLLMLFFGLFELQENQKLKDALNMS | |||||||||||||
2 | 2ef4A | 0.09 | 0.05 | 0.61 | 0.72 | DisCoVER | -ERVAVV----GV--PMDLGARRGVDMGPARLLEQLEDL-GYT-VEDLG--DV-PV--SL------RLAYLGGDHSLSMGSVAGRVG--VV--WV-DAHADFNTPTSPSG--NVHGMPLAVLLGFRAVDPKD----V--VL--VGVR-SLDPGEKRLLKEAGVRVYTMV--IAEVLLHVSL-DADVLD-----PT-LAPGVGTPVPGGLTYREAHLLMEILA-ES--GRVQ-SL-DLVEVNLDETAEMLVGLALSLL-------------------------GKRI------------------------------------------------------------ | |||||||||||||
3 | 5vchA | 0.06 | 0.05 | 0.82 | 1.00 | DEthreader | LYAKFASLIPSVVQVLDATDTNKLIFNCLNDFLL-LD---SQL-TGN-TIADLVKLALQIAVNS--D-VDEDIRVFAVQFVSALIGPEITLAALKVASEEIDVDENDEN---T-PALTALRLISNASGEL-SPSQVGVPIIEHLPTLRRSILLAISVLTGSPDYTLSQFDKIITCIVQLSTNL---------------------------------QD-EVARYHEQYLPLV--I------V--KYATLALDGLLEIYLDPLNKLFQLETQQPRAAIVSAIGSCAFAAGSG-FVPYFKTSVQYLQQFIQNVQILDDIELKALTFENIST-GRAVKVTLGREEN--- | |||||||||||||
4 | 7apkB | 0.07 | 0.06 | 0.97 | 0.64 | CEthreader | TKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPSSWLQSLASFCGAVFRKYPID-LAGLLQYVANQLK---------ASFDLLILKEVVQKMATMEQLEAGEQLKAEGGKKSSQRLKDALLPLCLLMAQQGVIFQELKLVGKLYDQCHDTLVQFGGFLASEMVMAPVHEAVVSLVWDDISPQFYATFMYDLAHTSYEREVNKLKVEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLENELCYDRVFIIYTVASNEASRYGRFLCCMLETVTRWHQLDYENFRHVVHKWHYKLTKASVHCLEYTHIRNILIV | |||||||||||||
5 | 6yleC | 0.06 | 0.06 | 0.95 | 0.87 | EigenThreader | ----EFIAVSTLARNL--EIAKGNEFHTILATLRSPVYINEQ--LLKSELSFLVTKILKLIRS-----GNDFDLWKGCHTSVVTCAYNQLLAAIYSRLEQKTGFYSSVISSSHQLFNTLISSVAIIIDLMKNKPTLSRTLITLSQYEPELVLPVLQRILKRNTKTQRLVCENFAYLHLLLVAFISLPTPFPGINSLCEVLLGVSNILPQIQFQGIRLWEIMVSKYGKCGILSSIELFINVVGSLKFEFATVFRLVNMIISVISQLIEVALFLSHDINDFFITALNNWILPSTPHIQILKYSITQSLRLKERFGYI----PESFVNLLRCEVLHPGSEILPIAISLL | |||||||||||||
6 | 2pffB | 0.13 | 0.11 | 0.80 | 0.32 | HHpred | AADDEPTTPAELVGKFLGYVSSLVEPSCLTEFE-------NCYLEGNDIHALAAKLLQ--------ENDTTLVKTK--EL------IKNYITA-RIMAKRPFDKKSN----SALFRAVGEGNAQLGQGNTDDYFEELRDLYQTYHVLVGDLIK---FSATLSELIRTTLDAEKFLNILEWLENPSNTP----DKDY---LLSIPISCPLIGVIQLAHYVVTAKLLTPGELR------SYLKGATGHSQGLVTAVAIAETDSFVSVRKAI-TVLFFIGVRCYEAYPNTSL-PPSILEDSLENNEGVPSPNLTQEQVQDYVNKT------------------------ | |||||||||||||
7 | 6tntN1 | 0.13 | 0.10 | 0.77 | 0.63 | MRFsearch | --------SPEFWNAISQCENSADEPQCLLL----------LLDAFGLLESRLDPYLRSLELLEKWTRGLREEVHTMLRGVLFFSTPRTFQEMI---------------------QRLYGCFLRVYMQSALEQFHQLSQVLHRLSLLERVSAEATTLHQVTRERMEDRCRRSFLREFHKWIERV-----VGWLGKVFNTLR----------RWRCHVQRFFYRIYASLRIEELFSIVRDFP--DSRPAIEDLKYCLERTDQRQQLLVSLKAALETRLL-------HPGVNTCDIITLYIPIRRYLRT-----------REDTVRQIVAGLTS------GEPEDWV- | |||||||||||||
8 | 6m3qF | 0.10 | 0.08 | 0.76 | 0.85 | FFAS-3D | --------------------------------------------QVEQYYFDVAEVEAWLGEQEMMSEDKGKDEQSTLQLLKK---HLQLEQGVENY------------------EESIAQLSRQCRALLHPDSEQISRRQSQVDRLYVALLEQQYWLYQLSRQVDELEHWQDFEHVSVLQEKFFASETGTAGRERLAAVNQMVDELIECGHTAAATMAEWKDGL-NEAWAELLELMGTRA-----QLLAASRELHKFFSDARELQGQIEEKRRRSMQRTL------RAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVLQG--WKELLAAC--- | |||||||||||||
9 | 1wa5B | 0.11 | 0.10 | 0.87 | 0.71 | SPARKS-K | AKRRNFQELPQMTQQLNSDDMQESATVKFRQSREHRPPIDVVIQAVPRLVEFMEMLQLEAAWALTNIASGT---SAQTKVVVDADAVPLFIQLLYTGS-------------VEVKEQAIWALGNVAG----DSTDYRDYVLQCN----------------AMEPILGLFNSNKIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSM--DTETLVDACWAISQEAIQAVIDLVELLSHESTQTPALRAVGNIV--TGNDLQTQVVINNIKKEACWTISNITAG--NTEQIQAVIDAIPPLVKLLEVA----EYKTKKEACWAISNASSGGLQRPIRYLVSQG | |||||||||||||
10 | 2z6hA | 0.09 | 0.07 | 0.82 | 0.90 | CNFpred | ---------REGLLAIFKS----GGIPALVKMLG------------SPVDSVLFYAITTLHNLLLHQ-------EGAKMAVRLAGGLQKMVALLNKT-------------NVKFLAITTDCLQILAY----GNQESKLIILASG--GPQALVNIMR-LWTTSRVLKVLSVCSSNKPAIVGMQALGLHDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLT----NYKNKMMVCQVGGIEALVRTVLRAGTEPAICALRHLTSRHQEAEMAQNAVYGLPVVVKLLHPP------SHWPLIKATVGLIRNLALCPANHAPLREQ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |