Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KLLLNDTFDHFLLSEAVITTYNTFHIDGRLQKDYYNPDELEERGLSNTNYSSWMQLRPYCFELIKGKRTPLNFKFVFQLSPANLEKLLVQTKLPMSSSDINGLFLNLKYDGHNLSCITGTSIRIFTMDKTLEQSWDTMVQKFLRQKEIAFE |
1 | 3lg8A | 0.06 | 0.03 | 0.51 | 0.64 | DisCoVER | | KLIGAISLGGELIVRLNKRDMELIDDLLEKEVENA----------TKKVTVLK--K------G-----EPVDIAGGCIIE-------------------TADGLKSLDNSLEAIFNRNL-------------------------------- |
2 | 5xmgA | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | | ECLRTFEI-EEWATDNGSYDDSIFYVSYYFTFPTNSAQRIKDLIA--RT-CFPYGF--IA-DD-GKT--A-YELKNSLR---FTR--T-----------PNVIFSLLTASADPLVAIQVQTFQTDL-YTPPPEEVLPRLKALSQ-SIEQ-- |
3 | 6nbpA | 0.11 | 0.11 | 0.99 | 0.52 | CEthreader | | --LTAQAQRLLVVSDNQELSLYPFNADFCYTSFNTNPQQMMAMGATKINIKDEFTVERIINEIFPAKLTDNVCCINFHPGLNPYNRGWYPQAFSIINGLPTGATIHLMDADHGDIIDQQEVEVKMSDTIAIEKHLISRNIFTIITRSYTTK |
4 | 5jenA | 0.05 | 0.04 | 0.83 | 0.67 | EigenThreader | | --------IVKAIEIKEEKD-QSSIDVKTSGLSNK----ELENSINEKYLKESQQLYKEFIQSTSKNKKGHLSIYSDYE----TVTDT-----PD----LLSIRRNIETTQASTQSRYITIDKKNDILPDQTFYITEDTGVISNLLVGEIR |
5 | 2giaG | 0.17 | 0.11 | 0.68 | 0.31 | HHpred | | --------------------LRVLHRDTFVVLDYHRQARMLT---EEGN-----------------KAER---VVSVMLPAVYTARFLAVLEGRSEKVEVHSRYTNATFTPNTLKCTSTRPDETFEWTVEFDVAESLMLQRFLTQA----- |
6 | 2kw7A | 0.18 | 0.11 | 0.64 | 0.70 | MRFsearch | | ----------------------------------LSNAQEE-------------VMNGRLRAIRSSH--AVEFAVVTLPLEDFTLKLARQWGVG-NEKNNNGLLLVLVLDQRRVRFETGYGLEGYLPDGLLSRIIHDRMIPHFRSG----- |
7 | 5anpA | 0.15 | 0.11 | 0.70 | 0.58 | FFAS-3D | | ----------------------TSVYD---YAELLSAAEKA-------------SLENKLIKYSD--TTSTQIVVVIIPSNYLGAQWGEKWGIGQAKED-NGVLIILALNDKRIAINTGYGVEHLLTDAMSKRIIELDITPFFKRKD---- |
8 | 4ffeX | 0.15 | 0.11 | 0.77 | 0.64 | SPARKS-K | | ---GHKLAFNFNLETVDVYLSQIITFDG---KDIRPT--IPFMIGDEIFLPFYKNVFSEFFSLF--RRV----------------------PTS-TPYEDLTYFYECDYTDNKSTFDQFYLYNEYTVKTTNKNMWLTTSEFRLKKW-FDGE |
9 | 2kw7A | 0.19 | 0.13 | 0.72 | 0.64 | CNFpred | | ----------------------RLVTDE---AGLLSNAQEE-------------VMNGRLRAIRSS--HAVEFAVVTLPS-DFTLKLARQWGVG--EKNNNGLLLVLVLDQRRVRFETGYGLEGYLPDGLLSRIIHDRMIPHFRSGNYAEG |
10 | 5xmgA | 0.05 | 0.04 | 0.74 | 0.83 | DEthreader | | QECTFEIPEE-EWAHDNGSYDSIFYVS-EKVDKFWR--NQ----------RELYE-VPCFGFI-ADDKTAYELKNSLRFTR--T----------------PNVIFSLLTASPLVAIQVQTFQKGT--YTPPPEEVLPRLKALSQ-SIEQ-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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