Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | SWVFGILSFFLALCGLFELFIQGNPQWGITGLVLAFLLSPFGLPAAAEWLVCKLDDLNYSLK |
1 | 3iegA | 0.05 | 0.05 | 0.89 | 1.17 | DEthreader | | HYKQVKKLNKLIESAEELIRD-GRYTDATSKYESV-KTEPVAT--VK--VLENAL-KDAQIL |
2 | 3snxA | 0.13 | 0.13 | 1.00 | 1.17 | DEthreader | | QVAVAGNAERLFNGAWYNLFEYGLIYKTIDNCNTAISIKGLRQGQAALYPNTDVNAARKGYS |
3 | 6t3hA | 0.18 | 0.18 | 0.97 | 1.17 | DEthreader | | SHDLLINFYFELFAGDYEFFK-KNYVKAISFYEKAEQKLSIETKFAAIY-EAQCSLVFAIIL |
4 | 4ui9O | 0.13 | 0.13 | 0.98 | 1.17 | DEthreader | | -GLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWLSLIDIANTESFAVCAQLWMLQ |
5 | 5b2gA2 | 0.16 | 0.10 | 0.60 | 0.48 | DisCoVER | | ---MIVAGVVFLLAGLMVIVPVVGWAASGLLLLGGGLLCC---------------------- |
6 | 7kalF | 0.08 | 0.08 | 0.95 | 1.17 | DEthreader | | NPKRSAQITKLKETANTAYKR-GNHGEAVRLYSYAIEMAAARL-SYCSVG-WWRGGKVALEI |
7 | 3v5sA1 | 0.08 | 0.08 | 0.97 | 0.52 | CEthreader | | GLILLYYGSDWFVLGSERIARHFSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALALDIS-- |
8 | 1qoyA | 0.05 | 0.05 | 1.00 | 0.43 | EigenThreader | | KYFEATQTVYEWCGVATQLLAAYILLKVLDDGITKLNEAQKSLLVSSQSFNNADSQLTNDFS |
9 | 5araT | 0.14 | 0.13 | 0.95 | 0.21 | HHpred | | --VLG-TGLILYLLSKEIYVITPETFSAISTIGFLVYIVKKYGASVGEFADKLNEQKIAQLE |
10 | 2ksdA | 0.12 | 0.11 | 0.95 | 0.25 | MRFsearch | | --ALALVVLAIVVQMAVTMVLHGESIDVIRSIFFGLLITPWAV-YFLSVVVEQLEESRQRLS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|