>PF18948 (329 residues) TAGWQLLGWVMVFAGLVVMNEIARRTKAGGIFCFLVLPAALTVYFIAIYIGAAKGAEWAL TNDTYVHMNSWFHYAKLYAATAGCIGFMMLKYKWSIGKKEWFKVFPFVIVAINILIAVGS DFESAVKGGISGGWWLSSENVWLYGGWWNWVNGIAGIINIFCMTGWWGIYSSKDKKDMLW PDMTWCYILAYDLWNFEYTYNNLPTHSWYCGLALLLAPTFANAFWNKGGWIQNRANTLAL WCMFAQVFPLFQDNSRFSVITSVYADGFMDPSIHPTSADPTMQGVVAIVALIANVCVLTA IIKRSVEQKKNPYKNEIFTDQKDYKLALE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TAGWQLLGWVMVFAGLVVMNEIARRTKAGGIFCFLVLPAALTVYFIAIYIGAAKGAEWALTNDTYVHMNSWFHYAKLYAATAGCIGFMMLKYKWSIGKKEWFKVFPFVIVAINILIAVGSDFESAVKGGISGGWWLSSENVWLYGGWWNWVNGIAGIINIFCMTGWWGIYSSKDKKDMLWPDMTWCYILAYDLWNFEYTYNNLPTHSWYCGLALLLAPTFANAFWNKGGWIQNRANTLALWCMFAQVFPLFQDNSRFSVITSVYADGFMDPSIHPTSADPTMQGVVAIVALIANVCVLTAIIKRSVEQKKNPYKNEIFTDQKDYKLALE | |||||||||||||||||||
1 | 3rkoB | 0.08 | 0.07 | 0.85 | 1.45 | CNFpred | SLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLAD--------------------NLLLMYLGWEGVGLCSYLLIGFYYTDNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELA-NNMLMWATLMLLGGAVGKSAQLPLQTWLADAMGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAA-IKRVLAYSTMSQIGYMFLALGVQAWD--------------------------AAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFL | |||||||||||||
2 | 4wgvA | 0.05 | 0.03 | 0.59 | 0.57 | DisCoVER | ----V--GY---------------------------------MDPGNWITSMQ-GGAQYGYTLLVILS--AAMLLQSMTVRLGIATGK----------------DLAQMT------------------------------------------HFLSKPVAIIFWAEAIIAT-------DIAEVIGSAIALGTLIFTVIFVEVFISIIGAT--I----------MPHNLYLHSSIVQQAIKYATIDS--NLQLS--IAFVNCLLL---TLGAALFFGNDLGGFYDLLFAVA--LLASGQ-NSTITG----TAGVTRLAVVIEQLLVFSQ- | |||||||||||||
3 | 4av3A | 0.05 | 0.04 | 0.69 | 0.83 | DEthreader | ----------------------M-EISSYIRSGADSFLAHETKAIFKVAIVIAILLMIFTTWTGVFLGAVMSASAGIVGMKMATRANVRVAEAARTTPALKVAYQGGSVMGLSVGGFALLGLVVYGVLVPFAMTSGYAG-VIVSILVAIAALGMLSFVATSVSVD-----EVRKITDHLAVTTAAIGKGFAIGSAIAA-LFGITYYFSGYLISAVT-----------------------IE-TSDNALK-QMG-YPAFIAILTPLTGVVGTSGL--IMSVVSVIA-------------------------------------------- | |||||||||||||
4 | 4or2A | 0.06 | 0.04 | 0.77 | 0.49 | CEthreader | AAAEQLKTTRNAYIQKYLIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSREL-CYIILAGIFLGYVCPFTLIAKPT-------TTSCYLQRLLVGLSSAMCYSALVTKTNRIARILARKPRFMSAWAQVIIASILISVQLTLVVTLIPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPE------------------------------------------------------------------- | |||||||||||||
5 | 5xtcs | 0.08 | 0.06 | 0.76 | 0.70 | EigenThreader | MPMANLLLLIVPILIAMAFLMLTE----RKILGYMQ--------------LPFADAMKLFTKEPLKPATSLALTIALLLW-------TPLPMPNPLVNLN----LGLLFILATSSLAVYSILWSGWASN--SNYA------LIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITTQPSWPLAMMWFISTLAETNGFNIEYMAEYTNIIMMNTLTTTIFLGTTYDATKTLLLTSLFLWIRTAYP---------------------------RFRYDQLMHLLWKFLPLTLALLMWHVSMPITISSIPPQT-------------- | |||||||||||||
6 | 3jacA | 0.13 | 0.12 | 0.88 | 0.37 | HHpred | -----YFVKCIYFA-LSAGNFLTKKYNHLNLFLFQG--FRLVPFLVELRAVM----DWVWTD----TTLSLSNWMCVEDIYANIFIIKCSRYPPGQKKKKIVKYGLIILFLIAIIWFPLLFMSLIRSV--VGVVNQPIDVTLKLGGAYEELSQQFLAMQFISQYSPVTAQIEG-SSGALWRISP-PSRAQQELNGFTWNFQRLANTAR-RQLA--------QLLEGRP----------DQSVVIPHLFPKYIRAPNNPVRIQLRREWIEPMVISDKVSPPSFLAGYGIVGLYVSIVLVVGKFVR--GFFSEISHSIMFEELPCVDRILK | |||||||||||||
7 | 6i1rA | 0.10 | 0.07 | 0.70 | 0.43 | MRFsearch | -ATIPFLAELFKLSVSGFFLWKECRKEWRSVRLYVVPSVIYLIHNNVQFATLTYILFRLVLKR-------KLSNIQWMAIVLLAVGTTTSQVKGCGDAPLEGYLLGILSACLSALAGVYTEYLMKKNND----------SLYWQNVQLYTFGVIFNMGWLIYGGPWWQRLF--------NGYSITTWMVVGLLVSWLMKYSDNIVKVYSTSMAMLLTMVLSIYLFSV---------------------------------------------------KATIQLFLGIIICIISLQMYFMPVHMLIEL--------------------- | |||||||||||||
8 | 5doqB | 0.12 | 0.10 | 0.84 | 0.75 | FFAS-3D | -VIGISVLWLFLFGYIIVASHILHRIIWEVTNVFLVFFFVGIVGFFPKTAYYYGSILLV-----------------PASIAIVLLAIRGSYYAFHTYGETERNWYLLAYGLTGLFIPASLSIVLTI---SEGGFVEENAAGVALDSPLSWSVVLLSVTSVLYISAVFLTYYADAAGDEQARALLRRYTMLSALLIIYQLRYHNPEHYWMLVISFLFFVITVWLLGRQRRFALLFQYAFAFYAYGISHYPYLLYPY-------------LTIYDGFTNETMAMALIVAFIAGLLLLIPSLYLLMRLFLFNK------------------- | |||||||||||||
9 | 6f2gA | 0.10 | 0.10 | 0.98 | 0.90 | SPARKS-K | GITALTVVVGTVIAGIFFKPTAVYGAAGLGLLAWFVAGIITIAGGLTVAEIGTIYPQEKVYGRWLGFLVGWAQMVIYYPANIAALAIIFATQFVNLFALSTIVPTAILTSIFLMGVNFLVVIIVAGLLYPGGGIRLVPFSVETHPVLTSFGSALIATLFAYD--GWINVGTLNPGKMLPIIGGLSIVMAVYLLTNIAYLFVLD-----SSQLATPAALVASHLFEGIGSKLVTIGILISVFGGINGYIISGLRATQKMLPFSDWFARINPKTNLPTGQFNQLTDLIVFVIWFFITLTFIAVIILRKTQPDIERPYRVPFYPVIPLIAII | |||||||||||||
10 | 4he8F | 0.09 | 0.07 | 0.79 | 1.44 | CNFpred | LDNLSGFMLLIVTGVGFLIHVYAIGYMYSRFFAYFNLFIAMMLTLVLAD---------------------SYPVMFIGWEGVGLASFLLIGFWYKNYADSARKAFIVNRIGDLGFMLGMAILWLSISELKEAMEGPLKNPDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMGPTPVSALIHAATMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAQTDIKKIVAYSTISQLGYMFLAAGVG----------------------------AYWVALFHVFTHAFFKALLFLASGSVIHAL-------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |