>PF18937 (267 residues) MFGYVTICEPELKVKDLRKYKAYYCGLCHTLKEKYGISGQMTLTYDMTFAILLLTSLYES ETQTESHRCKVHPVKKQVMLQNEITRYAADMNVLLAYYHLEDDWKDEKKVSAFAGKAALG RKAKKIMERYPRQSAAIRESLRELAECEKEGSTDLDRTAGCFGRLMEELFVWREDVWEKN LRRIGFFLGKFIYIMDAYEDLEEDIKKGCYNPLKKLYTQEDYEERLKQILCMMIAECSME FEKLPCIVDVDILRNILYDGVWNRYNK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MFGYVTICEPELKVKDLRKYKAYYCGLCHTLKEKYGISGQMTLTYDMTFAILLLTSLYESETQTESHRCKVHPVKKQVMLQNEITRYAADMNVLLAYYHLEDDWKDEKKVSAFAGKAALGRKAKKIMERYPRQSAAIRESLRELAECEKEGSTDLDRTAGCFGRLMEELFVWREDVWEKNLRRIGFFLGKFIYIMDAYEDLEEDIKKGCYNPLKKLYTQEDYEERLKQILCMMIAECSMEFEKLPCIVDVDILRNILYDGVWNRYNK | |||||||||||||||||||
1 | 4jyxA | 0.13 | 0.11 | 0.88 | 1.33 | DEthreader | -----MDLD--H---ILSLAEPDMLAVNQLIQKQVNGFVNSGKRLRPLLTVLAARAL-NIQT-------------------EQHHTLAAIIEFIHTATLLHDDVVDESTNEGNASVLVGDFLYTRSFQMMMQILSDATNVIAEGEVLQLMNTTEYMEVIYSTARLFEAATLLVKQSIENAMQDYGKYLGTAFQLVDDIMDYMGDDLAEGKPTLLLYAMGTGALTYTKQQALKASQQAIDALSPIEESVYKEALIGLAH-ISVERVA- | |||||||||||||
2 | 4jyxA | 0.13 | 0.11 | 0.88 | 1.33 | DEthreader | -----MDLD--H---ILSLAEPDMLAVNQLIQKQVNFIVNSGKRLRPLLTVLAARAL-NIQT-------------------EQHHTLAAIIEFIHTATLLHDDVVDESTNEGNASVLVGDFLYTRSFQMMMQILSDATNVIAEGEVLQLMNTTEYMEVIYSTARLFEAATLLGVSAIENAMQDYGKYLGTAFQLVDDIMDYMGDDLAEGKPTLLLYAMGMGALTYTKQQALKASQQAIDALSPIEESVYKEALIGLAH-ISVERVA- | |||||||||||||
3 | 4jyxA | 0.13 | 0.11 | 0.88 | 1.00 | MAPalign | ----------SMDDHILSLAEPDMLAVNQLIQKQVNQLGFYIVRLRPLLTVLAARAL-NI-------------------QTEQHHTLAAIIEFIHTATLLHDDVVDESETANQASVLVGDFLYTRSFQMVMQILSDATNVIAEGEVLQLDTTESYMEVIYSKARLFEAATLLAGEAIENAMQDYGKYLGTAFQLVDDIMDYGDDLAEGKPTLPLLYMEQTGALTYTKQQALKASQQAIDALSPIEESVYKEALIGLAHI-SVERVA- | |||||||||||||
4 | 1fpsA | 0.13 | 0.12 | 0.89 | 1.00 | FFAS-3D | --------SPVVVEREREEFVGFFPQIVRDLTEQYGKCNRGLT----VVAAYRELSGPGQKDAESLR---------------CALAVGWCIELFQAFFLVADDIMDQSLLLESSVYRVLKKYYVHLLELFLQTAYQTELGQMLDLITAPVSKVDKAIVKYKTAFYAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFTDIQDNKCSWVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNRLPKEIFLGLAQK-IYKR-QK | |||||||||||||
5 | 4jyxA | 0.13 | 0.11 | 0.88 | 1.17 | DEthreader | -----MDLD--H---ILSLAEPDMLAVNQLIQKQVNFIVNGGKRLRPLLTVLAARAL-NIQT-------------------EQHHTLAAIIEFIHTATLLHDDVVDESTETANFSVLVGDFLYTRSFQMMMQILSDATNVIAEGEVLQMNDTTEYMEVIYSTARLFEAATLLVQEAIENAMQDYGKYLGTAFQLVDDIMDYMGDDLAEGKPTLLLYAMGMGALTYTKQQALKASQQAIDALSPIEESVYKEALIGLAH-ISVERVA- | |||||||||||||
6 | 3lmdA | 0.12 | 0.11 | 0.92 | 1.17 | DEthreader | GVTTGAQVE-FGDPELTARINDAMVQVEELLHTELSVMTRAGGKRFRPMFALLASEFGEKPL------------------SENVIKAAVVVEITHLATLYHDDVMD-ARWDNSVAILAGDILLAHASGMTVAHFAETFGELVTGQMREVGPPIEYTNVIRETGVLIASAGYLMGAPHIDALKNFGAAVGMIFQIVDDIIDIGTDLREGVFTLPVLYALGSGGRQAALDEVYRYMDIANAELDRLPDSTVKEALRNLAT-FTVKRVGH | |||||||||||||
7 | 3lmdA | 0.13 | 0.12 | 0.92 | 1.17 | DEthreader | GTTGASQVE-FGDPELTARINDAMVQVEELLHTELSMTRAGGKRFRPMFALLA-SEFGEKPL------------------SENVIKAAVVVEITHLATLYHDDVMD-ARWDNSVAILAGDILLAHASGLMVAHFAETFGELVTGQMRETVGPPIYTNVIRETGVLIASAGYLMAPEHIDALKNFGAAVGMIFQIVDDIIDIGTDLREGVFTLPVLYALGSGGRQAALDEVYRYMDIANAELDRLPDSTVKEALRNLAT-FTVKRVGH | |||||||||||||
8 | 4dhdA | 0.14 | 0.12 | 0.86 | 1.00 | MAPalign | ----------DV---VSRLHQKYGAEVEKALVRYLIEAVLYQVRLRPLLTLAAAEAVSG-------------------QWR-PALPAAAIVELIHNYSLIYDDIIAFGDNAAILVGIWYREAIEEAVLDTAKEVAEVIKAIDEGERLDIEVTLDYIKMVSLKGALIAAAAKWGDRGLAEAAWNFGMAAGVAFQIIDDVLDIYKDIKEHKGNAVVAVLDSVGAREEALRLAARYREEAERHLAKI-PN--NGTLKELLDFIVREYA-- | |||||||||||||
9 | 3wjkA | 0.19 | 0.16 | 0.84 | 1.00 | FFAS-3D | ----------ELTAQDMAGVNAAILQLGYYIVSGGGKRIRPM-------IAVLAARAVGYEGNA-------------------HVTIAALIEFIHTATLLHDDVVDESDASVLVGDFIYTRAFQMMTSLSLKVLEVMSEAVNVIAEGEVLQLMIMRVIYSKTARLFEGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNDDLNEGKPTPLLEAMNACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAV------ | |||||||||||||
10 | 3n3dA | 0.11 | 0.10 | 0.88 | 1.17 | DEthreader | ---DRQLWR--Q---FP-QVEPQLTALQDYLLRTVQLLLKSGGKLLRPGYFYLFSTFGNAAT------------------PAQLQAGAAAIEILHVGTLIHDDVIDDSPRTIQTAIYAGDFMFTVYFDQVIQNHIDAMHRILQGELHQMDLITLYLNEIAGTAELFALSCYQQGQSVIDRTRDIGIAIGCAYQMLDDILDYQKPVLELSVYSLLLLSLVADGVGAAKQLAQDYTDRALTLIQQLPVGSAQQSLEQLTRLLLRR---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |