Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | GARSQLAAAFETTYGTAPTSGFMQMPFASASLGAEQPLLASELLGYGRDPLAPVRDAVTADGDITVPLDAEAFGFWLKAAFGAPTTTGTTNKTHTFKSGSWSLPSMAIEVAMPEIPRFAMYTGCVLDQLSLTMQRSGLLTADVKLVAQGETVATATAAGTPTAYALQRFGHFNGAIKRNGASLGNIVSADLTYANNVERIETIRADGRIDGADPSIAALTGKIDVRFADTTLMDQALNGTAASLEFSWVISANVSLSITAHAVYLPRPRVEIQGPQGIQASFDWQA |
1 | 5ngjA | 0.09 | 0.08 | 0.88 | 1.17 | DEthreader | | LRNTRIFVSTV----KTGHNNTQEILVQDISWGQ------------------------AAEWSFSTYILPVPDYMLWHALSSTGAHNN-ATNFMVNFKDNSYLAMLHIYILT-D-KTWSYIDSCQINQAEVNVDIEDIGRVTWSGNGNQLIPLEQPDPIGIDTYTISYIKNKLTILKIKNSYDIPITGGTFTINNNITYLTPVMS-TIPIGSFTGAFELTGSLTAYLNYKDLIKTLKVVNRFEIALVLGGDERPAAILVAKQAHVNIPTITDDV---LGTSVEFKA |
2 | 5ngjA | 0.10 | 0.08 | 0.88 | 1.17 | DEthreader | | LLRNTRIFVSTV---KTGHNTQEILVQDDISWGQ------------------------AAEWSFSTYILPVPDYMLWHALSSGAHNNA--T-NFMVNFKDSYLAMLHIYILTD--KTWSYIDSCQINQAEVNVDIEDIGRVTWSGNGNQLIPLDEQPFDDGITYTISYIKNKLTILKIKNSYDIPITGGTFTINNNITYLTPNVMSTIPIGSFTGAFELTGSLTAYLNYKDLIKTLKVVNRFEIALVLGGDERPAAILVAKQAHVNIPTITDDV---LGTSVEFKA |
3 | 5ngjA | 0.12 | 0.11 | 0.90 | 1.39 | HHpred | | LRNTRIFVSTVKTGH-NKT-NTQEILVQDDSWGQ------------------------AAEWSFSTYILPYKPYMLWHALSSGRAINLEGNFMVNFKDNSHELAMLHIYILTD--KTWSYIDSCQINQAEVNVDIEDIGRVTWSGNGNQLIPLDEQPFDPDMTIQGSYIKNKLTILKIKNKSYIPITGGTFTINNNITYLTVMSRVTIPIGSFTGAFELTGSLTAYLNDMELYKDLIKTNRFEIALVLGGEYRPAAILVAKQAHVNIPTIET--DDVLGTSVEFKA |
4 | 5ngjA | 0.10 | 0.09 | 0.90 | 1.17 | SPARKS-K | | LRNTRIFVST----VKTGHNKTNTQEIL---------------------VQDDISWGQAAEWSFSTYILPSKPDYMLWHALSSGAHNNATNFMVNFKDNSYHEAMLHIYILTDK--TWSYIDSCQINQAEVNVDIEDIGRVTWSGNGNQLIPLDEQPFDPIGIDQGSYIKNKLTILKIKDMDTNPITGGTFTINNNITYLTPMSRVTIPIGSFTGAFELTGSLTAYLNSMELYKDLIKTLRFEIALVLEYDDEPAAILVAKQAHVNIPTIET--DDVLGTSVEFKA |
5 | 5ngjA | 0.12 | 0.10 | 0.88 | 1.68 | MAPalign | | -RNTRIFVSTV---KTGHKTNTQEILVQDISWG------------------------QAAEWSFSTYILPYPDYMLWHALSSGGAHNNATNFMVNFKDNSYELAMLHIYILTD--KTWSYIDSCQINQAEVNVDIEDIGRVTWSGNGNQLIPLDEQPDETYMTIQGSYIKNKLTILKIKDKSYIPITGGTFTINNNITYLPNVMSRVTIIGSFTGAFELTGSLTAYLLYKDLIKTLKVVNRFEIALVLGGEERPAAILVAKQAHVN-IPTIET---DDGTSVEFKA |
6 | 5ngjA | 0.10 | 0.09 | 0.98 | 1.25 | CEthreader | | LLRNTRIFVSTVKTGHNKTNTQEILVQDDISWGQAAEWSFSTYILPYKDKNTSKQIV------PDYMLWHALSSGRAINLEGTTGAHNNATNFMVNFKDNSYHELAMLHIYILTDKTWSYIDSCQINQAEVNVDIEDIGRVTWSGNGNQLIPLDEQPFDPDMTIQGSYIKNKLTILKIKDSYDIPITGGTFTINNNITYLNVMSRVTIPIGSFTGAFELTGSLTAYLNDKDLIKTLKVVNRFEIALVLYDDERPAAILVAKQAHVNIPTIETDDVLGTSVEFKAIP |
7 | 5ngjA | 0.12 | 0.11 | 0.90 | 3.00 | HHsearch | | LRNTRIFVSTVKTGHN-KT-NTQEILVQDDSWGQ------------------------AAEWSFSTYILPYVPDMLWHALSSGRAINLETNFMVNFKDNSHELAMLHIYILT--DKTWSYIDSCQINQAEVNVDIEDIGRVTWSGNGNQLIPLDEQPFDPDMTIQGSYIKNKLTILKIKDKSYIPITGGTFTINNNITYLTVMSRVTIPIGSFTGAFELTGSLTAYLNDMELYKDLIKTNRFEIALVLGGEYRPAAILVAKQAHVNIPTIET--DDVLGTSVEFKA |
8 | 5ngjA1 | 0.11 | 0.07 | 0.65 | 1.60 | HHsearch | | LRNTRIFVSTVKTGHN-KT-NTQEILVQDDSWGQ------------------------AAEWSFSTYILPYVPYMLWHALSSGRAINLETNFMVNFKDNSHELAMLHIYILT--DKTWSYIDSCQINQAEVNVDIEDIGRVTWSGNGNQLIPLDEQPFDPDQIGIDDET-------YMTIQGSYIKNKGTFTINNNITYLTPMSRVTIPIGSFTGAFELT------------------------------------------------------------------ |
9 | 6gkxA | 0.08 | 0.03 | 0.41 | 1.21 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------RNVMSGTWGELWLDGNKVAEVKKFQAKMEFTKEDIIIAGQMG-T---KYMGYKGKGSITLYHVSSLIGEKIKRGSEFVAISKLNDPDYGAERIAVKNIAFDDLTLDWEVGVKGEIEAPFTF |
10 | 6te9G | 0.10 | 0.04 | 0.43 | 1.08 | HHsearch | | GKDLLIKLDL--Q--------FETIALRATRISFNAETVDVTSLESQGGWRELLGGVRSASISGAGVFKDADTDERARQIFFDG-----------------EVPE--FQVIIPDF-GIVQG-PFMITSIDYAGSHNGEASYELAMASAGALSFTA----------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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