Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120
| | | | | | |
| Seq | CAICLDSFTNKKVLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTEELWLHVLSVHPVNFRQSKAGQQHNLSAGEDSPLKLELYNTAPMENNSENSGGFRKFICRFCGLKFDLLPDLGRHHQAAHM |
1 | 6tkuA | 0.03 | 0.02 | 0.90 | 0.83 | DEthreader | | -IVVLKRSAGASFGGDIGIRLGILFVGSSPYVLDGFTHFYVLRVIKFEDNLLNV-NNQAIKQ-----INVQNGNVSVGQ-Q-ILPDGYINELPGVRQWSVPKYKDGLTALTL--VFGK-VDYIFVS |
2 | 5undA | 0.14 | 0.13 | 0.94 | 2.27 | HHpred | | CSLCSYASRDTYKLKRHMRTHSGE------KPYECYICHARFTQSGTMKMHILQKHTEKFHCPHCDTVIARQHIEQGKKCRYCDARYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKR-THT |
3 | 2ghfA | 0.07 | 0.04 | 0.55 | 0.83 | DisCoVER | | -----KKV---------------------EGGYECKYCTFQTPDLNMFTFVHSYVCVECNFLTKRYDALSHNHFKLTMVKRNNQTI-FE--Q--TIN----------------------D--LT-- |
4 | 5v3jE | 0.18 | 0.17 | 0.99 | 0.48 | MRFsearch | | CKDCDKVYSCASQLALHQMSHTGEKPHKGETPYKCKECGKGFRRGSELARHQRAHSGKPYKCKECGKSFKVHTGDRPHKCKECGKASELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT- |
5 | 6e93A | 0.19 | 0.16 | 0.82 | 3.79 | SPARKS-K | | CELCAKQFQSPSTLKMHMRCHTGE------KPYQCKTCGRCFSVQGNLQKHERIHLG-----------------LKEFVCQYCNKNETLKIHERIHTGEKRYHCQFCFQRFLYLSTKRNHEQRHIR |
6 | 5v3gD | 0.19 | 0.17 | 0.88 | 0.82 | MAPalign | | CRECGRGFSNKSHLLRHQRTHTGERTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFS-------------WQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTH-- |
7 | 2i13A | 0.21 | 0.17 | 0.85 | 0.66 | CEthreader | | CPECGKSFSDKKDLTRHQRTHTGE------KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQL-------------AHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG |
8 | 6e93A | 0.20 | 0.17 | 0.82 | 2.76 | MUSTER | | CELCAKQFQSPSTLKMHMRCHTGE------KPYQCKTCGRCFSVQGNLQKHERIH-----------------LGLKEFVCQYCNKNETLKIHERIHTGEKRYHCQFCFQRFLYLSTKRNHEQRHIR |
9 | 5v3jE | 0.21 | 0.20 | 0.94 | 1.43 | HHsearch | | CKECGKGFISDSHLLRHQSVHTGE------TPYKCKECGKGFRRGSELARHQRA-HSGDYKCKECGKSFTVHTGDRPHKCKECGKRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQK-IHT |
10 | 6e93A | 0.19 | 0.16 | 0.83 | 1.63 | FFAS-3D | | CELCAKQFQSPSTLKMHMRCHTGE------KPYQCKTCGRCFSVQGNLQKHERIHLGLK-------------EFVCQYCNKAFTLNETLKIHERIHTGEKRYHCQFCFQRFLYLSTKRNHEQRH-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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