Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | NSMIVVADGAKALFFRNEGDGEHPNLVVERKDEQDNPPDRAQSTDAPGRSFSSVGPGRSAYEETDFHQLEEDRFAANTAEMLNRRALEGDFESLVIVAPPRTLGELRKHLHKEAEKRIAAEIPKTLTGHPVSEIEKIL |
1 | 5lztii | 0.14 | 0.12 | 0.87 | 1.17 | DEthreader | | KFGFIVIDGSGALFGTLQGN----TREVLHKFTV-DLPKKHGRGGQS-------------ALRFALRMEKRHNYVRKVAETAVQLFISVNVAGLVLAGSADFKTELSSMFDQRLQSKVLKLVDISYGGENFNQAIELS |
2 | 5lztii | 0.15 | 0.12 | 0.85 | 1.17 | DEthreader | | KFGFIVIDGSGALFGTLQG----NTREVLHKFTV-DLPKGRGQSALR---------------FARLRMEKRHNYVRKVAETAVQLFISVNVAGLVLAGSADFKTELSSMFDQRLQSKVLKLV-DISYGENFNQAIELS |
3 | 4af1A3 | 0.16 | 0.14 | 0.88 | 1.31 | HHpred | | LYGLIVLDRRESNVGWLKGKR----VQPVKSAE----------SLVPGKQRKG-GQSAQRF--ARLRLEAIDNFYQEVAGMADDLFVPHEIDGILVGGPSPTKDEFLDYLHHELQDKVLGKFDVSYTDEGLSDLVDAG |
4 | 4af1A3 | 0.16 | 0.14 | 0.87 | 1.61 | DisCoVER | | LYGLIVLDRRESNVGWLKG----KRVQPVKSAESL-V-----P-------GKQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFVRHEIDGILVGGPSPTKDFLDGYLHHELQDKVLGKFDVSYTDEGLSDLVDA- |
5 | 4af1A | 0.16 | 0.14 | 0.86 | 0.73 | MRFsearch | | --GLIVLDRRESNVGWLKG----KRVQPVKSAES----------LVPGKQRKGG---QSAQRFARLRLEAIDNFYQEVAGMADDLFVPKEIDGILVGGPSPTKDEFLDGLHHELQDKVLGKFDVSTDESGLSDLVDAG |
6 | 4af1A3 | 0.17 | 0.14 | 0.88 | 1.47 | SPARKS-K | | LYGLIVLDRRESNVGWLKGK----RVQPVKSAESLVPGKQ-------------RKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFVPKEIDGILVGGPSPTKDEFLDYLHHELQDKVLGKFDVSYTDESLSDLVDAG |
7 | 3agjB2 | 0.13 | 0.10 | 0.79 | 1.03 | MAPalign | | TAVIAAVDYDEFALAVLAG----HGMKILEDTSARL--------------PGKDDPSR---------EQEVEKYVDRAAKRIVEEAARHRSPIAVIAGPGQLKTSVAEKVQRAMPSLKVATVDTSMGG--VAGVREAV |
8 | 3agjB2 | 0.14 | 0.11 | 0.79 | 1.02 | CEthreader | | TAVIAAVDYDEFALAVLAGHG----MKILEDTSARLPGKDD-----------------------PSREQEVEKYVDRAAKRIVEEAARHRSPIAVIAGPGQLKTSVAEKVQRAMPSLKVATVDTSMGG--VAGVREAL |
9 | 4af1A3 | 0.17 | 0.15 | 0.88 | 1.18 | MUSTER | | LYGLIVLDRRESNVGWLKGKR----VQPVKSAE----------SLVPGKQ---RKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFVRHEIDGILVGGPSPTKDEFLDYLHHELQDKVLGKFDVSYTDSGLSDLVDAG |
10 | 4af1A3 | 0.16 | 0.14 | 0.85 | 0.92 | FFAS-3D | | ---LIVLDRRESNVGWLKGKR-----VQPVK---------SAESLVPGKQRKGGQSAQRFAR---LRLEAIDNFYQEVAGMADDLFVPKEIDGILVGGPSPTKDEFLDGLHHELQDKVLGKFDVSYTDESGSDLVDA- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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