>PF18852 (213 residues) MPYSSYDHDKLETAETMRIERRIYFEAKDGDIAPYVSLPLEQLHAMREESAAAEQAIFND LSTRAAAWEQQAGKTLLLDKAIEYTRTTVVQHTSNEWQKGEYDRYTRSNRVYQMNYHIYE NTRYDREKQQSVPYSYSLTWGVYTNSPNRNGQAKIAGQDRKVFSDKAAMEKYLNGRIKAY DRLFTEISPPIPQEYAEHFKVNGMLLPGYTIEG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MPYSSYDHDKLETAETMRIERRIYFEAKDGDIAPYVSLPLEQLHAMREESAAAEQAIFNDLSTRAAAWEQQAGKTLLLDKAIEYTRTTVVQHTSNEWQKGEYDRYTRSNRVYQMNYHIYENTRYDREKQQSVPYSYSLTWGVYTNSPNRNGQAKIAGQDRKVFSDKAAMEKYLNGRIKAYDRLFTEISPPIPQEYAEHFKVNGMLLPGYTIEG | |||||||||||||||||||
1 | 3rwsA | 0.07 | 0.04 | 0.63 | 0.61 | DisCoVER | TMGVITSESEYVSSLSAEKLYRGIVE----DGNIIYPK-----------A---L---------------------------------PRFIEKAETLEGDGGPGTIKKLTFCAYTYSVYEGI-A-----LSDQPLEKIVFEFKLVPTPEEGCIVKSTTKYYTKGDDIEL-------------SKDYLEGIFE-------GFTAVESFLLANP- | |||||||||||||
2 | 7jv8A | 0.04 | 0.03 | 0.74 | 0.67 | DEthreader | ILHTVHSRLEQTSEDSKGTFEVMMAGIALGHGHSNTFLEVPAGKYAYLGYPILLNI-EDSIKADINKWRIKLDDY-S-TQELG-KTIVYLDGSSQSCREC---NMGN-----L-ICDMINNL-------MFNHVSMCILGIRSPIDERNDTINLAPFGGTFDLVQLTVLPFLAGGDGF----------------------------------- | |||||||||||||
3 | 2wnrB | 0.08 | 0.07 | 0.86 | 0.48 | CEthreader | NKILVAVYGPREAQIRKLQRAVIRCRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGTRCAGITAASVALADAGI----PMRDMVVACAAGKVGD-QVVLDLSEEEDKEGQADVPVAILP----RTREITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRK-------------------- | |||||||||||||
4 | 2zxlA | 0.02 | 0.01 | 0.66 | 0.63 | EigenThreader | QSQLLPCNLPPDVRNFNNSLHIRSGDK------------------------------------------------------------SSPIDFVITGVIT---SISGFLNAPNFVVELIQSS----------SKSLVLILDLPHRKDLVLNAFSPTASMLKAEELRDHVSPAAKEVLEVWLERCRRDKSFRRKSIEDDLDLRVVHAIKEAFGV | |||||||||||||
5 | 6y79Y | 0.13 | 0.06 | 0.46 | 0.36 | HHpred | ------------------------------------------------------------------------------------------------------GAP---AELSRRVVRIYQQAKPATQSGEYGTFAWRLDWDIVAENDLIGSSGDYMQATQMKFTSKESAIKFANKQGWDF-----YIQEFRVKQYANNFVHSYGKLKHI---- | |||||||||||||
6 | 4fkcA | 0.10 | 0.06 | 0.60 | 0.38 | MRFsearch | ------------------------------VISELREKDKDEIKAHKKAAEIVDKVFYRFIEGKLEGKSERELANRIEYMIKNEFG----------ADDVSFEPIVASGDVVIFDYGAKYL-----------GYCSDVTRTVVVGP------------------PSEEVKKVYEIVKEAQETAVQKVAEGIPAEVVD---------------- | |||||||||||||
7 | 6hsyA | 0.18 | 0.13 | 0.72 | 0.53 | FFAS-3D | -------------------------------VQGTVDELLSDIKANKAAYKADPQKLYATLDRILGPVEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKG------TVYPVSYTMTWKVR---NVIINGINIGKLFRDQF--ADTMQKNLEKTIAGWGEVVAKAKETAKAEEA----------------- | |||||||||||||
8 | 5wd6A | 0.05 | 0.04 | 0.80 | 0.58 | SPARKS-K | ---------------------------VLRKLKSGLERG---LDTFDSTIEIIQN-----LKTELETENFLEQLISRIFQVVSRLTGVRIRNVQVDITEATSENSANVLIPITADVTVSLP-----FLGEIVDLDLNVDLQTTVSIETDTEDPSLTVLHSRFGLVNDVVDIGVNLARRVVSSVVEGELCPRFRELLES--LDAECVEKLIGES | |||||||||||||
9 | 1uxiA | 0.12 | 0.08 | 0.61 | 0.59 | CNFpred | ----------------VPLPRFSTIS--GIPVSEFI--APDRLAQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDK-----------------------KRVMPVAAYLTGQY----------LNDIYFGVPVILGA------GGVEKILELPL--NEEEMALLNASAKAVRATLDTLKSL----------------------- | |||||||||||||
10 | 5x0mA | 0.01 | 0.01 | 0.74 | 0.83 | DEthreader | WI---DYWEVTFLNLVLCGEWE----D-NSTVLSHETM-DSRIETNIYM-YLYFIFFIVGSFFILKLFVCILIDIFRQQRRKAEGLS-TQ--YR-------------AVMRTMSAKPVKIPKPTCHPQ--------------L-YLEVYDTDDDYMFVWQQFDPEA--TQYIHIFYKDVLEALVKDVFSRRGS------------PVEAGVQ- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |