>PF18814 (240 residues) TKFSLQRAVEEKKDLIAIHNIKAQDMDRALQIGGFPMPSIAIVKDDAGHSKYGEISAVFG KETIDPEADKRNAVYGGDAWTPTVPRVDYEVNYEKKNAIEDEIETLARGVANGIFARASA LSSMGIDEETSLSKRELAEKLAGDDAVRAAYLAAQGKDIKPEYKEKVYDKYGNEFLQKIT DRYGEQKLEEMTKKLERGEELDEESISEVKEIWKQDQIKKMEKQFRNKTPEEIAKRAELR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | TKFSLQRAVEEKKDLIAIHNIKAQDMDRALQIGGFPMPSIAIVKDDAGHSKYGEISAVFGKETIDPEADKRNAVYGGDAWTPTVPRVDYEVNYEKKNAIEDEIETLARGVANGIFARASALSSMGIDEETSLSKRELAEKLAGDDAVRAAYLAAQGKDIKPEYKEKVYDKYGNEFLQKITDRYGEQKLEEMTKKLERGEELDEESISEVKEIWKQDQIKKMEKQFRNKTPEEIAKRAELR | |||||||||||||||||||
1 | 1yjxA | 0.07 | 0.04 | 0.63 | 0.62 | DisCoVER | LVLIRHGESWNLENRFSGWYDDICFTSVQAITWRLNERHYGGL-------------TGLNKAETAWRRSYDVPPPPMFYISPSCE--SLKD-------T---IARAL-----PFWEIVPQIKEGKRVLIA---A--HG-NSL--RGIVKHLEGNLPTGIPIVYE---L--------------------------DKNL-------------KPI--KP--MQ--FL-GDEETVRKAME-- | |||||||||||||
2 | 1w07B | 0.06 | 0.05 | 0.77 | 0.83 | DEthreader | W----------------VFEKS-NRA-RL------ELFSTKCAFINEARLRHFIDQPAYV---------VPNGCGGAYNSMDNG-VRTIADASNALSRAVCIATRYSV---TQQNRLFPLLASAAFRFVGEWLTAGLKLTTTATDGIEELLFAVYVPACTNVVLQLQVARFL-MKTVAQLGPAYMGRAAHLLQCR--SGVDNPDVVLEAFEAALRMA-ADLVEAA--------------- | |||||||||||||
3 | 6ep3A | 0.11 | 0.09 | 0.87 | 0.51 | CEthreader | -----------NKFKTLDKMVYNLLLEKIKNGELVPNEHLAE---EKLAREFGVSRSPLRKAIATLTAQGIVSYHENSGAVLNDCIVDADRYVQLMETIEIFVDAAIAKAAHFGYEMLYARMQEMERFSYLTDLENYFDAHHRLCLISFAENPYQVRIVKIFFQMVHFSDGINMFKSVEIREWTNKKSNQIYELLAEGKIELARKTIKSMFAELTIQAYRLE------------------ | |||||||||||||
4 | 5yfpH | 0.10 | 0.09 | 0.91 | 0.60 | EigenThreader | QKFINSTKGRHILMNSANWMTTT------------GKPMVQIFILN-----DLVLIADKKDVTRLLFKFSNSNSSLYECRDAITPDM----SSTAQRLLDEGVEEIDIELARLSAVETLLDIESQLEDLSLMLLNLISLKIEQRREAISSKLSQSILSSNLGLPEQALDLFLQNRSNFIQDLILQIKKTVEDFQDIFKELGAKISSILVDWCSDEVDNHFKLIDKQLSPGSIKSSRKQID | |||||||||||||
5 | 5ghrA3 | 0.14 | 0.06 | 0.45 | 0.25 | HHpred | ----------------------------------------------------------------------------------------------------------------RLFGRSRPLYQLAYAT--N----PEIPEITGDERKAIEWLRAKGFDPE------KYWQLREEEKRKLHEALLVHIKHKEAIDRLIGDVSPLYEGDVRHE--AREFATLLNATGRLNAGTLG------- | |||||||||||||
6 | 4pddA | 0.08 | 0.05 | 0.57 | 0.40 | MRFsearch | ------------------TPMAFPELFTALQQGT------------------VDGQENPIPVILSSKFSQVQKHLSL------YSPAVLILSSRVWDKLSEADKKVFVAAAQK-------------------ATVAQRKRVNDDEANGITQLKKDGMQVVEKVDGESFRKAVAPAYAGFAKEFGAERIAAIQAVKAE------------------------------------------- | |||||||||||||
7 | 6g70A3 | 0.13 | 0.07 | 0.53 | 0.64 | FFAS-3D | -------------------------------------------------------------------------------------------DQETNTTIRGTFEHAVLAAGTDFRSDKLWEMY-----------INWENEQGNLREVTAVYDRI--LGIPTQLYSHHFQRF-KEHVQNPRDLLTGEQFIQLRRELASVNTDPAKLITEIENM--RHRIIEIHQEMFNYNEHEVSK----- | |||||||||||||
8 | 4tqlA | 0.10 | 0.09 | 0.87 | 0.60 | SPARKS-K | ------------------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGDKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKEKIKKNIDKKIAEDLIKKAEEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG-------------- | |||||||||||||
9 | 6vvoD | 0.09 | 0.07 | 0.73 | 0.55 | CNFpred | -------------KIVILDEMTSAAQAALRRTMEKE-------------SKTTRFCLICNYSRIIEPLT--------------SRCSKFRFKPLSDKIQQQRLLDIAKKENVKI---------------SDEGIAYLVKVSEGDLRKAITFLQSATRLTGG-------KEITEKVITDIAGVIPAEKIDGVFAACQSGS--FDKLEAVVKDLI-TQLVNQLHDVVVNLSDKQKSIITEKL | |||||||||||||
10 | 3hjeA | 0.06 | 0.04 | 0.71 | 0.83 | DEthreader | -----------------KARPGSTHGYDVQDIVPNHMAVHH--------------TNWRLMDVLKGRHSYNFFIRIELIAVQSHRIDIFV---------L--S----------------IG---EK-LRWDFIGT-TGY-DF----LN-YSNLLFTDEMTDLDELVKETKKIILFKHDIERISMMGVNYEEIKEFSCNCSQKYESMKVAFMKLQQ-YMPAVFAKYEDTVLFIYNRLISAY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |