Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | VPVPCYLPLSCPKCSMTGTLNLQGGEKEKIVITKDGRFDLNSTLVCCSSDSCSYGAELTEKDYIQSNWWPGTPSSSTYLFSEDLLQFWFHLKHQNLGSSERKFIETLNRISKA |
1 | 3gn5A1 | 0.11 | 0.06 | 0.58 | 0.80 | DisCoVER | | ------HM-KCPVCHQ-GEMVSGIKD-IPYTFRGRKTVLKGIHGLYCVH--CEESIMNESDAFMAQVKAFRA---SVNAE--------------------------------- |
2 | 3d35A | 0.08 | 0.06 | 0.81 | 0.83 | DEthreader | | ------SLNDFLSVLVFEYL-----VKTQHFFSLVSLEVYVLIFV--VSVRDKILELIDPNYYQFPS----S---ADVIVPRKQFRAIKKYITGEEGEAFTNIRDFLLLRMA- |
3 | 3gn5A | 0.09 | 0.08 | 0.90 | 0.70 | CEthreader | | -------HMKCPVCHQ-GEMVSGIKDIPYTFRGRK-TVLKGIHGLYCVH--CEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR |
4 | 6a9tA2 | 0.09 | 0.07 | 0.80 | 0.72 | EigenThreader | | KIKSGQISGRSRFRNISGGCDKDAYIPVVATGFDDEMVLVDAAGSLG-----GYCADI------------------SRTWPNDLYEAVLNVQRDCIKLIHEKSITLMEKLYPH |
5 | 2qkdA | 0.23 | 0.19 | 0.82 | 0.30 | HHpred | | ----LQFNTNCPECNAPAQMKLIPHFKEVIIM-----------ATNCE--NCGHRTNTDPRDLLEFELGMAVLGKFTTL--EGLLKDRELV-TKNPGDSLQEFSQKLGQIIEG |
6 | 1v9pA2 | 0.15 | 0.11 | 0.73 | 0.57 | MRFsearch | | --RPIRWPETCPECG--------------------HRLVKEGKVHRCPNPLCPAKREKLIERLLEKGLVR----DVADLYHL----RKEDLLGLMGEKSAQNLLRQIEESKH- |
7 | 3cm1A | 0.10 | 0.08 | 0.83 | 0.38 | FFAS-3D | | ------------------GLQLIVPDRAPVPLVARLDYSVDDPRAAFHVGDDEPVEWIFARELLTVGIWPSQDGKERVNIAAPLSEFLHRTYELVPAGQESDYIDIDAEIAE- |
8 | 6z2lA2 | 0.16 | 0.12 | 0.77 | 0.71 | SPARKS-K | | --------FILDEAFIQYFFFINNEEP---VICKDGNINIKSALLHS--PFCEIKLDIS--EYIRK-----CDNNKECLIDP------LDVQKNLLNEEDPCYINNAYVSVNV |
9 | 1m2vB | 0.06 | 0.04 | 0.69 | 0.54 | CNFpred | | ------------------YCYVQV---AVLLSLNNSQRRIRIITLAMPTT-------ESLAEVYASA-------DQLAIASFYNSKAVEKALNSSLDDARVLINKSVQDILAT |
10 | 2oi2A | 0.05 | 0.04 | 0.83 | 0.83 | DEthreader | | --EDTLMAYLEYLNITEAIRCEIDE--K---------GMGSAIAIAVF-Y-YQADLLLVNRAEMIAHMNPSLKTCL-GHTR-EAIQVVQNKGKDALPLLAHHLKEIGVSSL-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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