>PF18754 (261 residues) RIILSRKGFDSSSGGCPSPILPDGRMVSLPIPDSRSKIRYRDLKLVDVNAGRLVSQLTRK KIIGSSGAHLDPDLSIGHLPRLLGWRPLLGQTGSAQGHLHKQGIEPDDIFLFFGLFRDAE IHNRRWRFVPGSKPRHIIWGWLQIDEILPVDSLDNDAYSWLNYHPHLHGEADKGNTLYVA RDYLSLPGIDKVPGSGIFDRFDPRLQLTQTGSEKPSQWQLPKWFFPGDRQPLSYHAKAGR WQQNKSHCLLSAVARGQEFVL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RIILSRKGFDSSSGGCPSPILPDGRMVSLPIPDSRSKIRYRDLKLVDVNAGRLVSQLTRKKIIGSSGAHLDPDLSIGHLPRLLGWRPLLGQTGSAQGHLHKQGIEPDDIFLFFGLFRDAEIHNRRWRFVPGSKPRHIIWGWLQIDEILPVDSLDNDAYSWLNYHPHLHGEADKGNTLYVARDYLSLPGIDKVPGSGIFDRFDPRLQLTQTGSEKPSQWQLPKWFFPGDRQPLSYHAKAGRWQQNKSHCLLSAVARGQEFVL | |||||||||||||||||||
1 | 2uzzB | 0.09 | 0.07 | 0.77 | 0.75 | DisCoVER | DLIIIGSVGAAAYAMTDAGSHHGDRHASGVINLGPAFLNVEKL-----DAQGIMARWPEIRVPDNYIGLFETD---------------SGFLRAIKTWD-GVTIYQAKKAIVCAGTWVK------DLLPELPVQPVRKVFAWYQADGRYSVK-------KF--PAFTGELPYYGFPAEDALKIGKFADGSEACCLYGA--A---CTYDN--S--PEDFII--DTLPGHDNTLLI------------TGLSGGFASLGAAA- | |||||||||||||
2 | 6rc9A1 | 0.06 | 0.05 | 0.73 | 0.67 | DEthreader | -----RNT-VVYERGL---------------LDPKTAYWRTPKWNDRTGFPRRHPEWFGQTVSAPIALIPYAFMDLPFNNNRW-F-YVPRM-VAGA--KF-VGREL-VLAGTIT----NLVAQGQGLLRE----YQPNSLFAAILNPELLAALPVPTNWSHFS-------------PTLSRFSTGFNLVG------NAQRAQLFLRLLGGLAWTQDLGGWLVLQLTVLGRVE----SVWDLKTTNGRLA---D-------- | |||||||||||||
3 | 5mt2A | 0.07 | 0.07 | 1.00 | 0.51 | CEthreader | TYVVYNGKTGTDGRGYETWIAERTLGRVLSYRDGKWDCNQRGGFPALPDEWGGSYELQTYKGRHWTYIGGEGTGYEAVKAPLFVGLASTKGDISTAHEWESLDKKDAQWWEKLTQYKSTVYWDKDKTLGAPFVFYNAGGRHPETDLKGERVGIALSKDKTWKRYPGNPVFAHEADGTITGDAHIQKGDVYVFYFSAFEPSRKYKAFNTFAASYDLVNWTDWADLIIPSKNYDELFAHKSYVIKHDGVVYHFYCAVNNAEQR | |||||||||||||
4 | 5i33A | 0.08 | 0.07 | 0.85 | 0.57 | EigenThreader | DICARCAGGNNAGEKLLPSGLINPECGVVVH--------VPSLFN----ELDTLERKGLKVAGRRAHLVKGSGLRVHHLFDPTFPAKFRGPTFMHNALSS------GKRVLVEGANALML---DLDYGTYPFVTSSSRVVGVIKAYTTRVEDLATVGETLQEVGAEYGTVTGRRRRCGWMKYSTM-----INGYTDGVEVEGFP-ADWKTDISNCKTYEEFPIKFIEDYLGVKVQY---VGVGPGRDQNVIIF-------- | |||||||||||||
5 | 2ar1A | 0.16 | 0.08 | 0.49 | 0.28 | HHpred | ---------------------------------------------HKFSIDDLAK------------------------QKTSPWD---GVRNAARNNMRA--MSVGDKVLFYHS----------------NTKEPGVAGLAEVVRLAYDDF-----TALDKTSEYFDPKATKEKMVDVKFVA-------------R---WDTVLTLHELKS-RRELQKMAL-FTQRR---LSVQPVASEYAY------------------ | |||||||||||||
6 | 3p42A | 0.18 | 0.08 | 0.45 | 0.62 | MRFsearch | -----------------------------------------------ATIKSVRQQLLNLNITGRLPVKLDPDFVRV-------------------DENSNPPLVGDYTLYTVQR-----------------PVTITLLGAVSGAGQLPWLA-GRSVTDYLQDH-PRLAGADKNNVVITPE-------------------------------------------------GETVVAPVALWNKRHPGSQLWL--------- | |||||||||||||
7 | 3g7sA3 | 0.12 | 0.08 | 0.72 | 0.39 | FFAS-3D | --------------------------------ELKYKIGFPSLYYPKISLADRIDAAAEKFGEKTAIISAEPKFPSE--FPESNFLEICEVTKKLASGISRKGVRKGEHVGV---------------CIPNSIDYVTIYALWRVAATVPINPYKSFELEHILNDSEAT-------TLVVHSLYENFKPVLEKTGVERVFVVGGEVNSLSEVDSGSEDFENVKVNPEEDVALIPY----------------TGGTTGPKGVL | |||||||||||||
8 | 5mz9A | 0.15 | 0.13 | 0.87 | 0.63 | SPARKS-K | QIIFSGVGYDSSSSSSST---KDQALAWSTTTSLDSKTGYKDLVTNDTGLNGPINGSFTGPIKTAYPV---------KKDQKSTVKNSYGDEGIGVFDALNQEPSRTDQIFVYGIVSKVNWSNSGLKSIAPDGFANSIANFSVGLKAGID--PNP-----------VMSGKKANGAVVLTRGRLNFNPGNDS----LLSTTDNNIPISTPFTAAESAVDLTTF------KEVTYNQESGLWVTDNMGFSVITVSRGIELNQ | |||||||||||||
9 | 5veoA | 0.13 | 0.06 | 0.45 | 0.77 | CNFpred | -----------------------INLGFLYWEEP--DDTGHDVGPDSPLMGSVISDVD-------------HKLG------------------YLIKMLKRAKLWNNVNLIVTSDHGMTQCSKRVIELDRY-KEHYTLIDHSPVAAILPKEGKFDEVYDALAGAH-------PNLTVYKKE-------------------------------------------------------------------------------- | |||||||||||||
10 | 5w1hA | 0.03 | 0.02 | 0.69 | 0.67 | DEthreader | MREAVAFARHLSSQTVELDSE----NSDFLL-------KPKGTMDKLANNILNFL--KDKELDVDFLTKDIYSMRN-D---YATHNSEKWVSANHMLGFLHSYKYV--------------------------------------SIAE---DKIAGVDI-DV----AVIDLSVKL--------RMNFQLLICAYINSTGADTELRNYIFRYSSFDRSFIYVFNVPTILYNIL--LQHFVNVRFEFARITILL--------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |