Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | RIILSRKGFDSSSGGCPSPILPDGRMVSLPIPDSRSKIRYRDLKLVDVNAGRLVSQLTRKKIIGSSGAHLDPDLSIGHLPRLLGWRPLLGQTGSAQGHLHKQGIEPDDIFLFFGLFRDAEIHNRRWRFVPGSKPRHIIWGWLQIDEILPVDSLDNDAYSWLNYHPHLHGEADKGNTLYVARDYLSLPGIDKVPGSGIFDRFDPRLQLTQTGSEKPSQWQLPKWFFPGDRQPLSYHAKAGRWQQNKSHCLLSAVARGQEFVL |
1 | 2uzzB | 0.09 | 0.07 | 0.77 | 0.75 | DisCoVER | | DLIIIGSVGAAAYAMTDAGSHHGDRHASGVINLGPAFLNVEKL-----DAQGIMARWPEIRVPDNYIGLFETD---------------SGFLRAIKTWD-GVTIYQAKKAIVCAGTWVK------DLLPELPVQPVRKVFAWYQADGRYSVK-------KF--PAFTGELPYYGFPAEDALKIGKFADGSEACCLYGA--A---CTYDN--S--PEDFII--DTLPGHDNTLLI------------TGLSGGFASLGAAA- |
2 | 6rc9A1 | 0.06 | 0.05 | 0.73 | 0.67 | DEthreader | | -----RNT-VVYERGL---------------LDPKTAYWRTPKWNDRTGFPRRHPEWFGQTVSAPIALIPYAFMDLPFNNNRW-F-YVPRM-VAGA--KF-VGREL-VLAGTIT----NLVAQGQGLLRE----YQPNSLFAAILNPELLAALPVPTNWSHFS-------------PTLSRFSTGFNLVG------NAQRAQLFLRLLGGLAWTQDLGGWLVLQLTVLGRVE----SVWDLKTTNGRLA---D-------- |
3 | 5mt2A | 0.07 | 0.07 | 1.00 | 0.51 | CEthreader | | TYVVYNGKTGTDGRGYETWIAERTLGRVLSYRDGKWDCNQRGGFPALPDEWGGSYELQTYKGRHWTYIGGEGTGYEAVKAPLFVGLASTKGDISTAHEWESLDKKDAQWWEKLTQYKSTVYWDKDKTLGAPFVFYNAGGRHPETDLKGERVGIALSKDKTWKRYPGNPVFAHEADGTITGDAHIQKGDVYVFYFSAFEPSRKYKAFNTFAASYDLVNWTDWADLIIPSKNYDELFAHKSYVIKHDGVVYHFYCAVNNAEQR |
4 | 5i33A | 0.08 | 0.07 | 0.85 | 0.57 | EigenThreader | | DICARCAGGNNAGEKLLPSGLINPECGVVVH--------VPSLFN----ELDTLERKGLKVAGRRAHLVKGSGLRVHHLFDPTFPAKFRGPTFMHNALSS------GKRVLVEGANALML---DLDYGTYPFVTSSSRVVGVIKAYTTRVEDLATVGETLQEVGAEYGTVTGRRRRCGWMKYSTM-----INGYTDGVEVEGFP-ADWKTDISNCKTYEEFPIKFIEDYLGVKVQY---VGVGPGRDQNVIIF-------- |
5 | 2ar1A | 0.16 | 0.08 | 0.49 | 0.28 | HHpred | | ---------------------------------------------HKFSIDDLAK------------------------QKTSPWD---GVRNAARNNMRA--MSVGDKVLFYHS----------------NTKEPGVAGLAEVVRLAYDDF-----TALDKTSEYFDPKATKEKMVDVKFVA-------------R---WDTVLTLHELKS-RRELQKMAL-FTQRR---LSVQPVASEYAY------------------ |
6 | 3p42A | 0.18 | 0.08 | 0.45 | 0.62 | MRFsearch | | -----------------------------------------------ATIKSVRQQLLNLNITGRLPVKLDPDFVRV-------------------DENSNPPLVGDYTLYTVQR-----------------PVTITLLGAVSGAGQLPWLA-GRSVTDYLQDH-PRLAGADKNNVVITPE-------------------------------------------------GETVVAPVALWNKRHPGSQLWL--------- |
7 | 3g7sA3 | 0.12 | 0.08 | 0.72 | 0.39 | FFAS-3D | | --------------------------------ELKYKIGFPSLYYPKISLADRIDAAAEKFGEKTAIISAEPKFPSE--FPESNFLEICEVTKKLASGISRKGVRKGEHVGV---------------CIPNSIDYVTIYALWRVAATVPINPYKSFELEHILNDSEAT-------TLVVHSLYENFKPVLEKTGVERVFVVGGEVNSLSEVDSGSEDFENVKVNPEEDVALIPY----------------TGGTTGPKGVL |
8 | 5mz9A | 0.15 | 0.13 | 0.87 | 0.63 | SPARKS-K | | QIIFSGVGYDSSSSSSST---KDQALAWSTTTSLDSKTGYKDLVTNDTGLNGPINGSFTGPIKTAYPV---------KKDQKSTVKNSYGDEGIGVFDALNQEPSRTDQIFVYGIVSKVNWSNSGLKSIAPDGFANSIANFSVGLKAGID--PNP-----------VMSGKKANGAVVLTRGRLNFNPGNDS----LLSTTDNNIPISTPFTAAESAVDLTTF------KEVTYNQESGLWVTDNMGFSVITVSRGIELNQ |
9 | 5veoA | 0.13 | 0.06 | 0.45 | 0.77 | CNFpred | | -----------------------INLGFLYWEEP--DDTGHDVGPDSPLMGSVISDVD-------------HKLG------------------YLIKMLKRAKLWNNVNLIVTSDHGMTQCSKRVIELDRY-KEHYTLIDHSPVAAILPKEGKFDEVYDALAGAH-------PNLTVYKKE-------------------------------------------------------------------------------- |
10 | 5w1hA | 0.03 | 0.02 | 0.69 | 0.67 | DEthreader | | MREAVAFARHLSSQTVELDSE----NSDFLL-------KPKGTMDKLANNILNFL--KDKELDVDFLTKDIYSMRN-D---YATHNSEKWVSANHMLGFLHSYKYV--------------------------------------SIAE---DKIAGVDI-DV----AVIDLSVKL--------RMNFQLLICAYINSTGADTELRNYIFRYSSFDRSFIYVFNVPTILYNIL--LQHFVNVRFEFARITILL--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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