>PF18752 (316 residues) FDSNEKVRNDLHKYIMAHTEGVKDMRHGQYAFAFYGSLGAQGGAFPLNRFTSLDLTAQGT SYYVCDINDFRYFKEKEEIIVKNPINYNIIREETNQPPIVAAPITVLQTMSKLTTSPYHS ESVIIKSLGYFTDPNYPKPKLVYQPIRYLYTQYHPCSVCTTKIMNSSFVNDMTNDNIRIR NLNGLGAMLPSTPPPTTPIAYKINSEESVTNLLLPSDTSKERLYLSFSRQWDIDYCHYIN IRKLAAKPGIQVVSAATNRYGDRHVGYQSTLVTELERSSMIDTRRPDGSIVSELFTFPTT FKSRESNWQYLINQAF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FDSNEKVRNDLHKYIMAHTEGVKDMRHGQYAFAFYGSLGAQGGAFPLNRFTSLDLTAQGTSYYVCDINDFRYFKEKEEIIVKNPINYNIIREETNQPPIVAAPITVLQTMSKLTTSPYHSESVIIKSLGYFTDPNYPKPKLVYQPIRYLYTQYHPCSVCTTKIMNSSFVNDMTNDNIRIRNLNGLGAMLPSTPPPTTPIAYKINSEESVTNLLLPSDTSKERLYLSFSRQWDIDYCHYINIRKLAAKPGIQVVSAATNRYGDRHVGYQSTLVTELERSSMIDTRRPDGSIVSELFTFPTTFKSRESNWQYLINQAF | |||||||||||||||||||
1 | 2pnqA | 0.04 | 0.03 | 0.80 | 0.72 | DisCoVER | SNRLRRSATTCGMLLGVFDGHAGCACSQAVSERLFY-YIA---VSLLPHLLIENAVLLPILQWHKFSEASKLY--FNGL-----RYWQLIDLDIDVKALINAFKRLDNDISLEAYLVLRVAFSGATACVAHVDG-VDLH-VANTGDSRA------MLGV---------------------------------QEEDGSWSAVTLS--NDHNAEVVKQDRLLGMPFRAFGDVKVGPYLTAEPEVTYHRLRPQDKFLVL--ATDGLWETMHRQD-VV--RIVGEYLGMHHQQQNAATHLIADDITI--IV-VQF-NS- | |||||||||||||
2 | 4ktpA | 0.03 | 0.02 | 0.69 | 0.67 | DEthreader | NRYEAAQAITEGSNFMIGNGF----------YRGTFAEDGKDAYAACVPNALLTLLHFIMFERTLDLS-QGVTSRKVIHE---AHAVL---IDYDVWSIN-------I---NRLEWNLSHYDIAIAGARGLS-----CQAYQGAADQNMPMYLYSNPIARNILYRLAYISPDIAYA--QGPDEYHENVNNAQYLTIPACIQDQLVLHPSSLSNEAVSGGTFIGGHTANGAS---WQMV---------------VNGFGGSPRLPDAW---------------------------------EHHH------------ | |||||||||||||
3 | 1vt4I3 | 0.05 | 0.04 | 0.94 | 0.61 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 3cr8C | 0.08 | 0.07 | 0.91 | 0.53 | EigenThreader | LIDPEKREALKHEALSLP--------------SLDLLMTGAYSPLTGFMTRALADRRPGERLALRDGEGYMLAILTLSDVWKERAGEVEGAALPPHPARQPMHRAQYEFCLKSAIENEANLLLH---PQVGGDITEAPLLPAPPPEASGRALLLRAIVARNFGCSAEKIGVRLIAYFQRRMRAGLKIPEWYPPRERQGFTVFFLSGLARALAARLMEMGGRCVTLLDGRDVNVRRIGFVASEITKN--RGIAICAPIAPYRQTRRDVRAMIEA----VGIEYEVPETPELAID-----TTGLAQILLKLEHEGYLR | |||||||||||||
5 | 2pffB | 0.13 | 0.09 | 0.72 | 0.52 | HHpred | -------------------------------------------AYS-TRPLTLSHGSLEHVLLVPTA----SFFIASQLQEQFNILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQ-ENDTTLVKTKELI----KNYITARIMA-----KRPF----DK---KSNSALFRAV---GEGN-AQLVA-IFGGQGNTDFEELRDLYQTYH-----VLVGDL-----I--KFSAETLSELIRTEKVFTENPSNTPDKDYL---LSI-PISCPLIGVIQLA- | |||||||||||||
6 | 2pffB | 0.18 | 0.03 | 0.16 | 0.55 | MRFsearch | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVRVIVAGTL------DTYGFSILDIVIN-----------NPVNLTIHFGGEKRIRENYSAMIFETIV | |||||||||||||
7 | 2qagC | 0.11 | 0.07 | 0.69 | 0.41 | FFAS-3D | -----------------NQVYRKSVKGFEFTLMVVGE-SGLGKSTLINSLFLTDLYSPEYP-----------GPSTVQVEQSKVLQLLLTIVDTPWQPVIDYIDSKFEDYLNAESRNRRQMPDNVQCCLYFIAPGHGLKPLDIEFMKRLHEKVNIIPLIAADTLTPEECQQFKKQIMKEIQEHKIKIYEFP------------LPLAVVGGRQYPWGVAE-----------VGEHCDFTILRNMLIRTHMQDLKDVTNN-----VHYENYRSRKL----------------------------------------- | |||||||||||||
8 | 4r04A | 0.12 | 0.11 | 0.92 | 0.55 | SPARKS-K | LSNTIEKINTLGAYNYTDESNNKYFKTSQKSIIHYKKYNDSTLEFNSKDF-------IAEDINVFMKDDINTITGKYYVNTDKSIDFSISLVSKNQVKVNGVYSSYLDFVKNSDTSNFMNDNISFWKLF-----GFENINFVIDKYFTLVGKTYVEFICDNNKNIDIYFGEWKTSSSKSTIFSGNGPIYNPDTGEDISTSLDFSYEPYINKVLIAPDLYTSLININTNYYSNEYYPEVLNPNTFHKKVNINLD-SSSFEYKWSTEGSQKIRIKGILSNTQSFN--------KMSIDFK---DIKKLSLGYIMSNFK | |||||||||||||
9 | 1vpkA | 0.08 | 0.06 | 0.71 | 0.72 | CNFpred | EVDTSLLEEMVEKVIFAAAK--DEFMRNLNGVFWELHK---------------------NLLRLVASDGFRLALAEEQIENEEEASFLLS----------LKSMKEVQNVLDNTTEPTITVRYDGRRVSLSTN-----------DVETVMRVV-ETFKTKVVVSRKELRESLKRVMVIASK-------------GSESVKFEIEE---------------NVMRLVSKSPDYGEVVDEVEVQKE--GEDLVIAFNP---------KFIEDVLKHIETEIEMNFVD---STSPCQINPLD-----ISGYLYIVMPIR | |||||||||||||
10 | 3venA | 0.06 | 0.04 | 0.73 | 0.83 | DEthreader | -H---M--RV-LGLNGSAERLTQAAFCLTVVAFDLPAMR-----WPHSDSEALD------ILL-------------PRDVFPRRT-DPPL---------HFVQHHLA------------VDGQGEEECVTLAHKITVLDTVPGSFFYEVSYTGLPGLMA--FAFDGYRL-NLIDPTERAWFAHLERIYRLP---RRDYERDLATQAALERAVFLASVLAERTLFVAGGV---GL--NATMNGKLLTRSVKMFVPPVAAGPGWAGEPRALGAPSMRSDLEVDA------RAAYTPQTVTSN-RY------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |