>PF18749 (379 residues) DGAGEELGGADVYLNVETEDLISNGRSSLDRLHPWADPQNSVNRVLEHIKSGDDINDVFL DDSINKKFVGFYNDITEECGPEDKQHSWAVLEKPENVIMYGPYYPNYNNGQHSEDLIIKQ TQELLESEDVSEDWNVYLFTLNSPCLARTIEPCMLNLMRKAFEWYTHHGVRTSIGYRKCW GFKGTKENVFKDVSYAQFELLFGSHDYENYLNRIKKSPGNNLVPLCEMMFLTIKRWLSQE NRNFKFHLDNTTPQRGRKTYFKKVCVISASGLQDESEVLTQEITTMLEAVHPSVLDEKEC LQEYLEKGKAFALDYSFNPEICDTDCTKLRLSFEQCWGDMVQDKYADLLRERLIENFNRG VVQLFIKDATALTKDYIQI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DGAGEELGGADVYLNVETEDLISNGRSSLDRLHPWADPQNSVNRVLEHIKSGDDINDVFLDDSINKKFVGFYNDITEECGPEDKQHSWAVLEKPENVIMYGPYYPNYNNGQHSEDLIIKQTQELLESEDVSEDWNVYLFTLNSPCLARTIEPCMLNLMRKAFEWYTHHGVRTSIGYRKCWGFKGTKENVFKDVSYAQFELLFGSHDYENYLNRIKKSPGNNLVPLCEMMFLTIKRWLSQENRNFKFHLDNTTPQRGRKTYFKKVCVISASGLQDESEVLTQEITTMLEAVHPSVLDEKECLQEYLEKGKAFALDYSFNPEICDTDCTKLRLSFEQCWGDMVQDKYADLLRERLIENFNRGVVQLFIKDATALTKDYIQI | |||||||||||||||||||
1 | 3bwtA | 0.07 | 0.05 | 0.77 | 0.61 | DisCoVER | GSIHSLCKDQHGCRFL-QKQLDIL---GSKAADAIFEET--KDYT--VLMTD-SFGNYLIQ--KL-LEE--VTTQR--IVLTKISSPFVEISLNPHGTRALQLIIK--EAQIVVDSLRPYTVQLS-----KDLNGNHVIQKCLQRLPN-FQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKL-LALVDKLTLDPFGNYVVQYIIKEAEKNKYDYTHKIVHL-----------LKPRA------------IELSIHKFG---------S---N--VI--EK-ILKTAIVSEPMILEILGGEGIQSLLDS-YGNYVL------QT--AL-DIS-------------HKQNDYLYKRLSEIVAPLLVRII- | |||||||||||||
2 | 3dtpB | 0.08 | 0.06 | 0.74 | 0.83 | DEthreader | DKKVEDMAE--------------------SGLIYVINPYKQLPIYSEKIIDYKGKKRPAIAAQSILC--T---GE---S----GAGKTENTKK--VIQY-----------------------QGPSFSYGEKQLANLEGNAKTVKND-----NSSRF------------ANIETYLLEKSRAIRQAERTFFYLILLLFQTLMFTEQTSILRVVSSQLTAAVIELAKAKFERLFRWILTRNKGLDIAGSFE-------CINYTNEKQQNHFDFGLDLQPCIELERPGLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQ-ILHYAGKVTYN-AS-WLTK-NM--DPLND----------TVGQLYKEQLTKLMTTLRN- | |||||||||||||
3 | 3zpcA1 | 0.12 | 0.05 | 0.39 | 0.54 | CEthreader | -------------------------------------------------------SELKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQ----LIGEGFHPKAGQPHAEVFALRQAGEQAQ--------GATAYVTLEPCAHYRTPPCAEALVKAQ---------VKKVVVACPDPNPLVAGKGVQILKNAGIEVEIG-----------------ICEDLAAKLNQGFLKAMSTGM------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 2khoA | 0.05 | 0.04 | 0.76 | 0.68 | EigenThreader | PFKIIAADNGDAVEVKAEVLKKMKKTAEDYLGVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAY----GLDKGT---GDLGDISIIEVDGTNGDTHLGGEDFLVEDLVNRSIEPLKVALQDAGLSVIDDVILVG------------GQTRMPMVQKKVAEFFGKEPRKIGAAVQGGVLTGDVKDVLLLD--------VTPI--------NPAPRGMP----------------QIEVTFDIDADGIASSGLDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGKAAIEAKMQELAQKLMEIAQ----------------------------------------- | |||||||||||||
5 | 1vt4I | 0.16 | 0.13 | 0.79 | 0.50 | HHpred | ---------EDAFVNFDCKDVQDMPKSEIDHIIMSKDAVSGTLRLFWTLLSKQEE---MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMYIEQRD--RLYNQVFAKYNVSRLQPYLKLR--QALLELRP-A--KNVLIDG----VLGSGTDVCLSYKVQCK------------MDFKIFW------LN-LKNNSPETVLEMLQKLLYQID-PNWT-SRSDHSSNIKLRIHSILRRLLKKPYENCLLLTTRFKQVTDFLSAATTTHI-SLDHMPDEVKSLL------LKY----LDCRPQDLPREV---------LTTNPRRLSIIAESIRDGLAT-WDNWKCDKLTTSSLNVLRKMFDIPTILLSL------------- | |||||||||||||
6 | 3dm5A | 0.08 | 0.06 | 0.77 | 0.40 | MRFsearch | -----------------LDNLGKALANTLKKIARASVDEALIKELVRDIQRALISKKEHIIKIVYEELTKFLGTEAKPIEIKEKPTILLMVGI----------------QGSGKTTTVAKLARYFQKR----GYKVGVVCSDIEVFGNPQEKDAIKLAKEGVDYFKSK--GVDIIIVDTAGRH---------------------KEDKALIEEMKQISHEVILVIDQQAYNQALAFKEATIGSIIVTK--------------PIKFIG----------EPFDPPRFVSRLLG-----LGDIQGLLEKFKELEKEVEIKEEDIERMYAQLEAMRLKKFKVIMDSMINYSRIKRIARGTSTKDVKELLDQYRQMKKLFKSM | |||||||||||||
7 | 6v9iC2 | 0.12 | 0.09 | 0.77 | 0.74 | FFAS-3D | ----EDSIVRKLMLDTWNESIFSNIKNRL---------QDSAMKLVHAERLGEAF-----DSQLVIGVRESYVNLCSN--------------PEDKLQIY---------RDNFEKAYLDSTERFYRTQAPS-------------YLQQNGVQNYMKYADAKLKEEEKR--------ALRYLETRRECNSVEALMLAECQGMIKRNETEKLMFSLMDKVPNGIEPMLKDLEEHIISAGL-----------------------ADMVAAAETITTDSEKYVEQTLFNRFSKLVKEAFQDDPRFLTARDKAPELLANYKLTSEEIEAKLKEVLLVLKYVQKDVFMRYHKAHLTRRLILEIEENMVEWYVNKLARMFQDI--- | |||||||||||||
8 | 6vvoE | 0.13 | 0.11 | 0.84 | 0.54 | SPARKS-K | --------------------WVDKYRCSLGRL---DYHKEQAAQLRNLVQCGDFPHLLVYGPSKKTRIMCILRELYGVGVEKLQTITTISTIASNYHLEVNP----SDAGNSDRVVIQEMLKTVAQSQQSQRDFKVVLLTEV--------DKLTKDAQHALRRTMEKYMSTCRLILCC-----NSTSKVIPPIRCLAVRPAPSIEDICHVLSTVCKKEGLNLPQLAHRLAEKSCRNLRKALLMCACRVQQYPFTADQEIP-----------ETDWEVYLRETANAIVSQQTPQRLLERGRLYELLTHCIPP-----------EIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQAIYHLEAFVAKFMALYKKFMED | |||||||||||||
9 | 4hb2C | 0.11 | 0.09 | 0.79 | 0.74 | CNFpred | -----------------TIQLYKSEREVLVYLTHL-NVIDTEEIMISKLARQIDGSEW-----SWHNINTLS-------------WAIGSISG----TMS----------EDTEKRFVVTVIKDLLDLKRGKDNKAVVA------------SDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIV-----QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQ------------QVHTFYKACGIIISEEVAERNRLLSDLMQLPNMAWDTIVEQANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNMLYRAVSSMISAQVTKTPKVRGLRTIKKEILKLVETYISK | |||||||||||||
10 | 5bqnA | 0.07 | 0.05 | 0.67 | 0.83 | DEthreader | -----------------------------------LITTPSSDTNPSLSKPPR------------------------MGDSSTP-----------------RHTTNI-----IITPSV-LI--FG---PLPNILDYASTLQSNPSFEG-F--GT-LSI-LKVAPLDPVALHQLYIPSDK--E-QLREKALG----------------------------NIDKFNSLYSDLTNVMSEVRTHYFSRHYNRYYYLESQKLIYTLAKVNKGVNWNEVVEDFTTNIMIPYIGALNIFLLEFITTFNHINYQMYDSLSYQAIKNLKNS-LDVKISEAMNNINKFIRECSVTYLFKMLPKVIDELNKFDLRTKTELINLIDSHNI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |