>PF18744 (207 residues) PAALRVIVDYVNWPLTLGTVQYAFVVSLPRETCNQPTNLQEQLPEEVLNAMNQALARQGG QYTPNDGPIVAARPRHRKTRWQHSEWRLLHGEENSWVAQLKARTCRPTCCLILFTLNSPC TSMCLAENGPYNILSMTRAAFSDIDNNYQAFVFQRIFRNDTWPLVTRQELLEAWHRLHDV PLLRCDNNGCQDCAATDPENNPCLAGK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | PAALRVIVDYVNWPLTLGTVQYAFVVSLPRETCNQPTNLQEQLPEEVLNAMNQALARQGGQYTPNDGPIVAARPRHRKTRWQHSEWRLLHGEENSWVAQLKARTCRPTCCLILFTLNSPCTSMCLAENGPYNILSMTRAAFSDIDNNYQAFVFQRIFRNDTWPLVTRQELLEAWHRLHDVPLLRCDNNGCQDCAATDPENNPCLAGK | |||||||||||||||||||
1 | 2g84A | 0.14 | 0.10 | 0.68 | 0.55 | DisCoVER | LAAPEARMGYVLVRNIDGGPFAAAVFER----D-----S--G------------------LL------IAAGTNRVVPGSAAHAEILALAQAKLDTH--DL--SADGLPACELVTSAEP------CVMCFGAVIWSG----------VRSLVCAARSDVEAIGFDEGPRPENWMGGLRGITVTTGL-----------LRDAACLLY- | |||||||||||||
2 | 3fawA | 0.09 | 0.07 | 0.77 | 0.83 | DEthreader | ----------------------------FAKIAFAVIYEAH-VRFGTLLPVLSYFYVDPQSYFLILKLDVVYHTAKESFGGGR---LGTTHAMSRVLVDSIKYLSEFKVDGFRFDM-------MG-----DHDAAAIELAYKEAKPNMIMIGEGWTFQGDQGKPVKP--QD-WMKSTDTVGVFSDDRNGFGI-NIKAQPGNVQYIII | |||||||||||||
3 | 4rnfA1 | 0.05 | 0.04 | 0.71 | 0.59 | CEthreader | RTLFQDRLHTALQQAERNGQWVVLMFLDLDNDSLGHAAGDRML-QEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEFFVTASIGVALSP----QDGAELSLLMKNADTAMYHAKEMGKNNFQFY------------------------------------------------------- | |||||||||||||
4 | 2rpzA | 0.07 | 0.05 | 0.74 | 0.62 | EigenThreader | SSGRNFFKFQFRNVSSGRNKTFLCYVVEVQ------------------------------SKGGQAQATQGYLEDEH--AGAHAEEAFFNTILPAF-------DPALKYNVTWYVSSSPCA----------ACADRILKTLS-KTKNLRLLILVSRLFMWEEPEV---QAALKKLKEAGCKLRIMKIQENFLYYEEKLADILKSGPS | |||||||||||||
5 | 1tpfA | 0.18 | 0.14 | 0.80 | 0.28 | HHpred | QQSLSELIDLFNS-TSIN-HDVQCVVASTFVH---LAMTKERLSHPKAQNAI----AKSGAF--TGE--VSLPILKDFGVLGHSERRAYYGETNEIVADKVAAA-VASGFMVIACIGETLQER---ESGRVVVLTQIAAIAKDWAK--VVIAYEPVWAIGTGKVATPQQAQEAHALIRELRILY----------------------- | |||||||||||||
6 | 2rpzA | 0.12 | 0.07 | 0.57 | 0.43 | MRFsearch | --PVNFFKFQFRNVEGRNKTFLCYVVEVQSKG---------------------------------GQAQATQGYLEDEHAGAHAEEAFFN---------TILPAFDLKYNVTWYVSSSPCAAC----------ADRILKTLSKTKNLRLLILVSRLFM------WEEPEVQAALKKLKE---------------------------- | |||||||||||||
7 | 5k81A | 0.10 | 0.06 | 0.60 | 0.52 | FFAS-3D | -----------------------------------KPQIRNMVEPMDPRTFVSNFNNRPILSGLDTVWLCCEVKTKDPSGPPHPEMRFLR-----WFHKWRQLHHDQEYKVTWYVSWSPCTR-C---------ANSVATFLAKDPKVTLTIFVARLYYFWK------PDYQQALRILAEAG-------------------------- | |||||||||||||
8 | 7bx9A | 0.11 | 0.08 | 0.71 | 0.50 | SPARKS-K | NGRTRIAASYIRDRFHT------DFIDLSESELPLYNGEEEQNELPSVQALRRQVKKSA--------AVVLLSPEYHSGMS-------------GALKNAIDDHWAYKPVAIIAAAG--------GGKGGMNALANMRTVMRGVYAPKQLVLDPIHIDMERRTVSMAVSLKDMIEELNMFT-------------------------- | |||||||||||||
9 | 1e0wA | 0.10 | 0.07 | 0.72 | 0.83 | CNFpred | RQAMIDHINGVMAHYKGKIVQWDVVNEAFADGARRDSNLQRS-GNDWIEVAFRTARAAD------SAKLCYNDYNVENWTWAKTQAMY------NMVRDFKQRGVPI-DCVGFQSHFNSG----------SPYNSNFRTTLQNFAALGVDVAITELDIQ----GAPASTYANVTNDCL----------------------------- | |||||||||||||
10 | 5wvqA | 0.06 | 0.05 | 0.84 | 0.83 | DEthreader | GAV-VDPYAK-GT---------------KPPLPDAVIYELHVRDLGKLLPIYNWGYDPQNYVPLKLIVMDVVYHVGTPGYLRECASRIMRKYIIESILHWVREYH---IDGFRFDLMGMI---DI------ETMNEIRRRLDEIDPTILTIGEGWMM-ET-VLPKEL-ANQDNAEKL-PGIGMFNDGMRDGGGINYRQSVNYPFLHQ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |