Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | IIENICYKFHSVARQLQSRHSDRSTLEIEDEYDVQDLLHALLKLHFDDIREEEYTPSYAGSSSRVDFLLKDENIIIEVKKTRKNLKAKEVGEQLIIDKAHYTAHPNCKSLICFVYDPDARISNPNGLEKDLERNNNDLNVKVIIAPK |
1 | 4g6uA | 0.11 | 0.09 | 0.80 | 1.00 | DEthreader | | -----ATA-TV--N-ASE------IGQWGNQGPWEDYVGKSL---PADARLPKNF-------KIFDYYDGATKTATSVKSIDTKQVYSSIKGNIDAAAKF-KETSSISNREIQLAIPDTTQWEINRAIEYGKSQ----GVKVTVTQV |
2 | 1fiuA | 0.06 | 0.05 | 0.84 | 1.00 | DEthreader | | ----F-TQERRIFHKKLL-D--G-NILNGSGNAFEAICSEFVQSFEWNVKQVGSNRSD---TITPDIIVTRLHASISCKWTI---RSDRA-QNARSEGLNLVNRKGLPHIVVVTAE--PTPSRISSIALG-T-GE---IDCVYHFAL |
3 | 1xmxA | 0.11 | 0.10 | 0.83 | 1.00 | DEthreader | | ----------GERWASLSDLAKIAFAFANG-EWLETLVHSTVKQIQDQDRSNVQVYRQ-EVRNELDVATVVNKHIIECKTKG--MRDGD--DTLYKLESLRDLLGGQARAMLVSFR--P-L-R-HNDITRAEDL----GLALIGPDE |
4 | 6ek1A | 0.10 | 0.09 | 0.93 | 1.00 | DEthreader | | RHKAALSTLTELLGDLGGF-RSAHSFAKNVGENFVNLMVYALACILNLVDKGLKLTLSIKIPIEGDLCVFSNAIVISAKTR---LK-EVF-HIGTMWALFSDASLKDTMYVFATADMISQGCDVPNIAMDASFF-----DYVFVSKM |
5 | 3bm3A | 0.10 | 0.08 | 0.84 | 1.00 | DEthreader | | ---F--TP-SRIAKLEEKAFEIYKERFSRGGKAFEIIFTKLLNKFGIRYEHDRVIKI----GEKPAFIIPTSAILITVKRKV---R--ERWREAVGEAQILRKFG-EINFWFVGFD--EEF-T-IYSAIA-LDNG---IDRVYVIGR |
6 | 2gb7B | 0.16 | 0.12 | 0.78 | 0.37 | HHpred | | --PTHIYDLALSNTQSRRSRAG---------KEFESILELLMMGAGI--PVDVQ-GA-IQIGKLVDLVMPGVTMLISAKTTLR-ERWQEVPEEVNRT--------GIREMYLATLDDS--FS-EETIN-ILYEAN----VVVV-TTV |
7 | 5gkeA2 | 0.12 | 0.09 | 0.71 | 0.94 | DisCoVER | | -------LTG-------------------SEAEMAELIFENPEVIEPGFKPLFREKAIGTGIVAVLGRDSGNIVVLELKRR---R-A--ELHAVRQLKSYVEILEYKVRGILVAPS---LTSG---AKRLLEKE--GL-EFRKLEP- |
8 | 1m0wA | 0.12 | 0.11 | 0.90 | 0.57 | MRFsearch | | --VQIQPVFNELYARITQDMAQPDSYLHKSDSEFTGKLWSLYLATLKNFRLG---------IFRSDYLIDKQIKQVEFNTVSVSDSGYLLSKALAKAVESYKSQQSDPIVAFIVQRNERNVFDQKVLELNLLEK---FGTKSVRLTF |
9 | 5gkeA2 | 0.16 | 0.12 | 0.78 | 0.67 | SPARKS-K | | --------------------DYEELALTGSEAEMAELIFENPEVIEPGFK--PLFREKAIGTGIVAVLGRGNIVVLELK--RRRAE-LHAVRQLKSYVEILREEYGDKVRGILVAPSLT-----SGAKRLLEKE--GLEFRKLEPPK |
10 | 6uxfA | 0.13 | 0.12 | 0.88 | 0.76 | MAPalign | | -LENLHADVQHKLTTVRK--------SFKKGDGAENVWVDLFNQYLYRAS-RAFVVDSENQFSQIDVVIYDVYAVFEVKQT---LNK-QHIDAARKKVASVRALIGI-IGGLLTLEN--ELKIPDTLMGHLHDKADKGMLNGCAADD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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