Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | WIRGLISSLDELEQSLFAASFFRKSVKAGYMDDMSVSEQGDYARYVYFYKNGFIRVFSLLDKLGTVLNTLYDLNTVRVKAHFSYFTVLRRFRSTKKHRELSGRLDEIKESYRDPMQKLRNRRNAEIHYMNSEMQDDLWQRHQGLHDKIRLEDLDEHLEDLRQGMEMVCKTLVEVFTYS |
1 | 4grvA1 | 0.07 | 0.06 | 0.80 | 1.00 | DEthreader | | LQSTVHYHLGSLALSDLLILLAMPVELNFHHPWFDAGCRGYYFLRDACTYATALNVASLSVARYLAICHP-FKAKM---LVIILNTVIANKLT-VM-VQALRHGVLVARAVVIAFVVCWLP--V---------------------------TNALAYASSAINPILYNLVSANF-RQV |
2 | 6qd6A | 0.06 | 0.05 | 0.84 | 1.00 | DEthreader | | AFSAASDMINNAQKIVQETQQLSANQ--PKNISLAAQKMLKNAQSQAEILKLANQVESDFNKLSSG---HLKDY------------IG--KC--D-NNWGN-GC--AGV-EE-TQSLLKTSAADFNNQT-PQINQAQNLANTLTINQANLERAKTLAGTAYQATLLALRSVLGLWNSM |
3 | 4grvA | 0.06 | 0.04 | 0.79 | 1.00 | DEthreader | | THYHLGSLALSDLLILLLAMPVEYNFIVHH--PWA-FGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHAKM----FLVISILNTVIANKTVLRHGVLVARAVVI-A--FVVCWLPYHV-R--------------------------FYMLTNALAYASSAINPILYNLVSAFV |
4 | 6qd6A1 | 0.09 | 0.08 | 0.85 | 1.00 | DEthreader | | DINNAQKIVQETQQLSANQ--PK--N--ITQPLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSG-----------------L--KDYGKCGCAGVEETQSLLKTSAADFNNQT-PQINQAQNLANTLIQELGNN-TSAAIQANNNERAKTLAGSAYQATLLALRSVLGL |
5 | 6gy6A | 0.06 | 0.06 | 0.87 | 0.58 | DisCoVER | | SWSKVQQQSIDLENAGKQITLTGDEIINKLGDLTDKQLAEITYTMKKDIKRQQ-NTQKVKTAVSDFKLKLI-GGE-----LSDGTIAQ-GLQPQISMVDAEEALNHLDFMWNTMLTQI------TT-SRDKFD--DI---N--DALKLFVIAFKQVIEPWRDVQGSAAQLIQTFDEA- |
6 | 5nddA | 0.06 | 0.05 | 0.79 | 1.00 | DEthreader | | PAVIYMANLALADLLSVIWFPLKIAYHIHGN-NWIYG-EALCNVLIGFFYANMYCSILFLTCLSVQRAWEIVNP-----LFPALTASAYVLMI-RALASKRKRAIKLAVTVAAMYLICFTPSNLL------------------------YIVLCLST-LNSCIDPFVYYFVSH-F--- |
7 | 5j65A | 0.08 | 0.08 | 1.00 | 0.59 | CEthreader | | LYPLIIKSANDIASYGFKVAGYFKKLQDEAIAKAIKDFKARCGILIKEAKQYEEAAKNIVTSLDQFLHGDQKKAHKELLEKVKLDRDVKIIGMLNSINTDIDNLYSQGQEAIKVFQKLQGIWATIGAQIENLRTTSLQEVQDSDDADEIQIELEDASDAWLVVAQEARDFTLNAYSTS |
8 | 5msjA | 0.07 | 0.07 | 0.90 | 0.88 | EigenThreader | | LGSYFPKKISELDAFLKELSNLKAPLDIPVPDPVPCGPVNCNEKIVVLLQRLKPEIKDVTEQLNLVTTWLQLQIPRIEDGNN---FGVAVQE------KVFELMTNLHTKLEGFHTQISKYFSERGDA--------VAKAAKQPHVGLVHELDEAEYQEIRLMVMEIRNAYAVLYDII |
9 | 5i1uA | 0.09 | 0.08 | 0.84 | 0.29 | HHpred | | -ERAFADLWRRITLTDRWRARAACNWEYCHPRPPDREGYLTLRRGTIFHHPLFRQLRQLAADIPSFTNDVRSFAQEA-----NLVMIVRR--DRCC--STAEACAVVWDEAQRMADRFCDLR------------DQLPDACRSMSLD---PAQRLAAERYADGMALWLAGYLWES--- |
10 | 1av1A | 0.13 | 0.12 | 0.93 | 0.42 | MRFsearch | | --DSVTSTFSKLREQLPVTQEFWDNLEKEGLRQEMSKDLEEVKAKVQPYLDDFQKKWLYRQKVEPLRAELQE----------GARQKLHELQEKEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKAEYHAKATEHLSTLSEKAKPAGLLPVLESFKVSFLSALEEYTKKLNT- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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