>PF18725 (215 residues) NAVTLAQPLEIGAELDWGAEVWSEVRTRATRAGRAYVWLNLVEQRLRAVVNAVLRPIYEP VHGEEWVVAAAGPAGHEWVQRAVAVREVSRRKGFLLDPADDNVLSFLTLPQLRELVVQHW PCFEPYFDDRRDLELALDELEVARHVVSRNRALSRTVLDQAERAAARLLELLGAGPARTA AQRLPVDAVEDLVADRYSDVIGVYPDRVRLQRQLP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NAVTLAQPLEIGAELDWGAEVWSEVRTRATRAGRAYVWLNLVEQRLRAVVNAVLRPIYEPVHGEEWVVAAAGPAGHEWVQRAVAVREVSRRKGFLLDPADDNVLSFLTLPQLRELVVQHWPCFEPYFDDRRDLELALDELEVARHVVSRNRALSRTVLDQAERAAARLLELLGAGPARTAAQRLPVDAVEDLVADRYSDVIGVYPDRVRLQRQLP | |||||||||||||||||||
1 | 4pqzA | 0.10 | 0.06 | 0.62 | 0.57 | DisCoVER | --PLQFDK---------------------VSQNVFEQVKETIFFAIDHTLRKEYGED--------IGF-IDY---------------------------NPDKLT--TIENASNYIYLFWVVFSELFTCSKIKKNEWKSLPTVL--KS--KPTNLNDLRTFEQFWETVLHFL---F-SKFTNEE-KQSLEKQIH-EWKTSINAIS---------- | |||||||||||||
2 | 6gmmA1 | 0.09 | 0.07 | 0.81 | 0.83 | DEthreader | ---ARGNL-----------N-ASAKNLINDKNSPAYQAVLLALNAAAGLWQVMSYAISPCGTFHNTPICTENYA-K-INKAYQIIQKAFGS--DIPLK--I---NAVLLEQASTIITTLNCACGIFKNEISAIQDMIKNAAIAVEQSKIVANAQAEILNRAQA-VVKDFERIPAFVKDSGVCVAYVGETVTNLKDSIAHF--------------- | |||||||||||||
3 | 5yjcA | 0.08 | 0.07 | 0.89 | 0.62 | CEthreader | HEVFPEINEKYRDDALKKSLFHYLLLNMRYNRLDVAETLIRVKSIAEFILKTYIEIHWPTLIIEKDGKPYLNDEDNLSFVYKYNLLLEKRK-------QNFDVSRILGLPAFIDILTILEPN-----SQLLKEVNAVNDINGLRNSIAHNLDTLNLDKNKNYKKIMLSVEAIKNMLHISF------PEIEEEDYNYFEEKNKEFKELLE------ | |||||||||||||
4 | 5yjcA | 0.08 | 0.07 | 0.83 | 0.75 | EigenThreader | EVFPEINEKYRDDALKKSLFHYLLLNMRYNRAETLIRVKSIAEFILKTYIEIHWPTLIIEK--DGKPYLNDEDN--LSFVYKYNLLLEKR---KQNFDVSRIL----GLPAFIDILTILE-------PNSQLLKEVNAVNDLRNSIAHNLDTLNLKKIMLSVEAIKNMLHISFPE-----IEEEDYNYFEEKNKEFKELLE-------------- | |||||||||||||
5 | 2pffB | 0.17 | 0.15 | 0.91 | 0.39 | HHpred | NAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVG---DLIKFSAETLSELIRTTL----DAEKVLEWLENPSTPDKDLSIPISCPLIGVVTAKL--LGFTPGELRSYLGLVTAVAIAEDSWEFFVSVRK-------AITVLFFIGVRCYEAYPNTSLPPSILEDS-LENNEGV--PSPMLSISNLTQEQVQDYVNKTNSHLKQVEISLVNGAKNL- | |||||||||||||
6 | 5yjcA | 0.09 | 0.07 | 0.73 | 0.47 | MRFsearch | -----------------ALKKSLFHYLLLNMAETLIRVKSIAEFILKTYIEIHWPTLIIEKDGKPYLNDEDNLSFVYKYNLLLEKRKQNFD-----------VSRILGLPAFIDILTILEP-----NSQLLKEVNAVNDINGLRNSIAHNDTLNLDKNKNIKNMLHISFPEIEEEDY------NYFEEKNKEFKELL------------------ | |||||||||||||
7 | 4hteA | 0.09 | 0.07 | 0.83 | 0.79 | FFAS-3D | NAFSYNTTLKNAKDLKKQKTSLEDRLNKIEDIEDRQKKLESINEVFEKQAGIFFDKNYPD----------QSLNYSDDEKIFITRTILNDRDVLPANNELEDIVKEKRIKEAQISLNT---VLGNRDISLESIAAASNFFADKLSNILEKNNLSFDDVLLKIDYYTNKLEVF--------------RNAENILEDYY---------DVQIKELFT | |||||||||||||
8 | 6w2rA | 0.10 | 0.09 | 0.90 | 0.77 | SPARKS-K | -----------GTTEDERRELEKVARKAIEAARETDEVREQLQRALEIARESKTAVKLALDVALRVAQEAAKRGNKDAIDEAAEVVVRIAEESNN----------SDALEQALRVLEEIAKAVLKSEKTAKKAVKLVQEAYKAAQRAIEARTGTPDVIKLAIKLAKLAARAALEVIKRPKSEEVALKKIVKAIQEAVESLREAKREKARERVREA | |||||||||||||
9 | 5j1iA | 0.16 | 0.13 | 0.79 | 0.64 | CNFpred | ------------------LGKLEQVRSLSAIYLEKLKTISLVIRGTQGAE-EVLR------AHEEQLKEAAVPATLPELEATKASLKKLRAQAEA-----QPTFDALELRGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESAD--------------PLGAWLQDARRRQEQIQ-DSQAVREQLR | |||||||||||||
10 | 5w1hA4 | 0.06 | 0.05 | 0.82 | 1.00 | DEthreader | HMLGDSVKLCGTINRNIFRDLMDYSEIADELQGQLINWIYLRERDLMNFQLGYHYLKTYVTLKIAQPLYYVDKDSSE-TVSDG-KE--------------------STGAKIGEFYRKSDCYASGLEINISEHDNITELRNYIEHFRYYSSFSFLGIYSEVFDRFFT-Y----DLKYKNVPTILYILLQHFVNYSE-QFTYKL-V-V-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |