Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | PRSIYPLQHHCINPNCQRTQKGLALKKAEQRQAVLYMLDSGPIPVWSVHLYCEKCKVNYHSNFHVHQGKRVYYGGIPDVIQVGEHQFVEHKVVELWVTLMVVSWTSATNCTRFYNTA |
1 | 3gn5A1 | 0.11 | 0.06 | 0.55 | 0.96 | DisCoVER | | -------HMKCPV--CHQ----GEMVSG-IKDIPYTFRGRKTVLKGIHGLYCVHCEESIMN------------KEESDAFMA-----QVKAF---------------------RVN- |
2 | 5xbjA | 0.10 | 0.08 | 0.79 | 0.83 | DEthreader | | KKVNIKTVISIEG--FSIVINFHPLKLDYDDKN------------KSYSIYYETKVRDL----TA----KISLGAQLLRGRYSYEDGIIGYMDSLDTFAKTMIASSGTDASDMK--Y |
3 | 6zymu | 0.12 | 0.12 | 0.97 | 0.69 | CEthreader | | VRLMAPFNMRCKT--CGEYIYKGKKFNARKETVQ--NEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQLNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQA |
4 | 6bb9A | 0.05 | 0.04 | 0.91 | 0.60 | EigenThreader | | ------AMFLINGLAVSDRATQFGDGSFTTARIVD----GGHDSGVLKVIISRGAATRILAYLTLSLKHALVLDSEGWVTECCAATPRLDQAGIMRQFCLRQLAQSPQFLAPFCEHP |
5 | 4bz4A | 0.17 | 0.09 | 0.56 | 0.28 | HHpred | | ----------------THHSWFVKLKKGKPVTIALTTEVSGLHPSITVWYRAGA--KNPKTLPYMNG---HAYKQFGDIYEPNAEA------------------------------- |
6 | 5g3sA1 | 0.09 | 0.05 | 0.56 | 0.43 | MRFsearch | | ------------------------------------------LPLFKGFLTYG---EPWWLDVLIVDLRKIYFKGDKYLF-----FYTDSEMANYWRGCVGYLEQIRTHLASALG-- |
7 | 6zymu | 0.14 | 0.12 | 0.84 | 0.34 | FFAS-3D | | -RLMAPFNMRC--KTCGEY-----IYKGKKFNARKETVQNEVYPIFRFYIKCTRCLAEITFDYTMEHGATRNFQLNNP-----------MKVLENRTKDSKLEMEVLENLQELKDLN |
8 | 2q30A | 0.07 | 0.05 | 0.77 | 0.67 | SPARKS-K | | ----HKSHNLLEAVRFDDQRFVELVHESENFKIVSFTFKAGQELPVHLNIVVLEGEGEFVGVIPAPRGAVLVAPSTPHGVRATDKVLVTIAPPI----------------------- |
9 | 3eh2A | 0.05 | 0.03 | 0.66 | 0.63 | CNFpred | | ------------------------------VELAGLDG----DKTVTVEFKHDD-ESGALLQCA-----LLYTSCAQRRLRIHNLALNCCDLYRNCETDTLINYMAKFAYRGVLNSP |
10 | 5xfmA | 0.08 | 0.07 | 0.86 | 0.83 | DEthreader | | PDEKLQLAVVPLGFTKNL---KLTGHSVDKIDTVYQ-KV-NVHYRANELTCHLEKLGVIFRAFRYTLGATPWRTITVITVPWDVVS---FI-NTVGSQNPVQN-------PTTWQTY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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