Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | FILSYLFTRPKLRLLPQLNHQVTQAFTYPVLDLFGQPQKEDTWEYLQDLVTSGFLKQGAAHSEIQACPSCHAGLLNFTSNCPNCHSVDIQEQQFIHCFTCGHIGPISEFMLREQLRCSRCHTKLRHIGIDYDKPLEDKLCLNCKHSFFEYEVNVTCLVCKKQSMPQDLLTRKLYEYNL |
1 | 5cawA1 | 0.12 | 0.06 | 0.48 | 0.75 | DisCoVER | | ---------------K-A------------------------------------------H-FFIYCACKKINTGKLRVCCSECKHGAFTVDTD-P----QSWADV------------------------LDKNKITGVCNNVGCEGLYAKFYFKCASHPSQD-T--AVPLNSHWF-- |
2 | 3pflA | 0.04 | 0.03 | 0.75 | 0.67 | DEthreader | | DFDVASTTSHDALIPGIK--------MIE-GS--C---KAY--NR-E-LDP---MIKIFRKTHNGV-LTGLPDAYGRGRI----IGDYRVIDYLM--------KDKLAQFTSLQAD-----NLQTIRLEEIAEQRALMKAAIQYFGYLAASQNGAAYLFPIWCSMQFFHYMHY----- |
3 | 6djwA | 0.09 | 0.08 | 0.84 | 0.85 | CEthreader | | RTLSVNLEPQWDIKNVKEIVAPQLGLQPEEVKIIFAGKELSDATTIQECLGQQILHAIRSRHFFVHCAQCKLCKGKLRVRCSLCKGGAFTVHRDPECWDD-----------------------------VLKPRRITGHCESQEIACPFTEFYFKCGEHVSGGEKDFAAPLNLIKINI |
4 | 1otjA | 0.07 | 0.06 | 0.89 | 0.72 | EigenThreader | | ----------SERLSITPLGPYIGAQISGAHAVLRHQQAITPQQQRALAQRFGELHTFIAILAAKELP--STGGDTLWTSGIAAYEALLSGLRAEHD--------FRKSFPEYKYRKTEHQRWREAVAKNPPLLHPVVRTPVSGKQALFVFQVRWRWQPNVTQHLPQRRIMHRATILG |
5 | 6gym6 | 0.15 | 0.12 | 0.80 | 0.48 | HHpred | | -------------LLPVPAHCTRELIVF---GSLSTTDPGDIHQTIDSLVSEKIRVK--VLGQVALCKATNYGLLDLKEAVGGGGGGGGGGGGGPTRISCHS-K-----LVYGGYFCPNCHSKVCSLPTPTTEKFRSEDCFSCQSRFPGGGSRYRCEDCKQEFCVDC----------- |
6 | 5edvA | 0.18 | 0.12 | 0.65 | 0.60 | MRFsearch | | ------------------------LTDDTQLLSYFSTLEPDAYALFHKKLTEGVLMR---DPKFLWCAQCSFGFIQLEATCPQCH--------QTFCVRCKRQWEEQMYLQENGIDCPKCKFSYALA-------CMHFHCTQCRHQ--------FCSGCYNAFYA------------- |
7 | 5v3gD | 0.16 | 0.10 | 0.60 | 0.50 | FFAS-3D | | --------------------------------------SNKSHLLRHQRTHTG--------EKPYVCRECGRGFRDKSYVCRECGRGFRDKSNLLSH--------QRTHTGEKPYVCRECGRGFSHTG---EKP---YVCRECGRGFRDKSNLYVCRECGRGFRNKS----------- |
8 | 6knbB3 | 0.18 | 0.15 | 0.81 | 0.94 | SPARKS-K | | --------------------------KPPVQVLFPIGLAGGQSRDIKKAAEEG--KTARVEIAFFKCPKCGHVGPEHL--CPVCGTRK---ELLWHCPKCGADYPESDAKDFNY-RCPKCDVELKPYAEREIKPADLLRQAMDNVKVYGIDRLKGVKGMTSGYKMAEPLEKGLLRVKN |
9 | 3nw0A | 0.19 | 0.10 | 0.51 | 0.90 | CNFpred | | QVLQKFVQN--KWLIEKE-----GEFTLHGRAIL------EMEQYIRETYP----------DAVKICNICHSLLI-QGQSCETCG--------IRMHLPCV----AKYFQSNAEPRCPHCNDYWPH---------------------------------------------------- |
10 | 3czjA | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | | TQ-AAHPLPPYDEANIETHGVPMNRLT---WLPAMSSGHGANHDALYRWIKSVDPRPVQYECPMYAQPFPAVPK-CEYAHAMGNSLNLALAKQQFQFRQTIEV--------SDNELLHWGEVPLDVAGKQLVAWQ-------QENRLTAIGGDDS-----WSPSVS------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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