Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | FIFDTNVLLKLYSYQPNTLSDFFSILKKLGDKIWIPHQVGLEFQNRRLDIKAKEKQKFSELEKQLDEILKVENKINQLFLKGRFPNLDVATENLFNDIRKLVDGYKNTLNQCNESQPNIRSHDSIREKIDDCFKGKVGSPFSQEDLEKIYEDGEKRYENKIPPGFKDNNKNSSTDYFYKGVEYKRKFGDLILWKQIIEKAKDENIKNVIFITDDEKEDWWYIAKENGDK |
1 | 3zvkA | 0.15 | 0.07 | 0.50 | 0.62 | DisCoVER | | YMLGTNICVYAINK---HPDSYYNNLELLNNTIAISSIVLAELQYGVSKS------------------------------------------------------------------KKKEQNQSKLDIFLSRL--EIID-F----SAKCTFYY------GELRLLII------------------GNNDLLIASHAIAE------NATLVTNNEFKRIWD--------- |
2 | 1p49A | 0.10 | 0.08 | 0.79 | 0.83 | DEthreader | | FMTGYPMAVFLFTASSGGMSCDFCHPLHHGFNY-F----GI-LTN-LRDCGSVFTTGFKLVFLPLQIVGVTLLTLAALNCLGL---LH-VPLGVFFSLLFLAALILTLFLGFLHYFRPLNCFMM-RNYEII-EAFLLVLVIL--IYF-TS-----------------IYKGG-K---------GGIRVGTSNMDIFPTVAKLAGAPLPRIDYCNAYLNA-P--C-ATHV |
3 | 4xgqA | 0.11 | 0.06 | 0.57 | 0.67 | CEthreader | | MVIDTSALVAMLS--DEPDAERFEAAVEADHIRLMSTASYLETALVIEARF----------------------------------------------------------------------GEPGGRELDLWLHRAAVDLVAVH--ADQADAARAAYRTYGKGRHRAG----------------LNYGDCFSYGLAKISG-------QPLLFKGEDFQHTDIATVALP- |
4 | 2h1cA | 0.09 | 0.05 | 0.58 | 0.82 | EigenThreader | | MILLDTNVISEPLRPQRVVAWLDSLI---LEDVYLSAITVAELRLGVAL----------------------------------LLNGKKKNVLHERLEQS----------------------------ILPLFAGRILPFD-----EPVAAIYAQIRSYAKTHGKEI------------------AAADGYIAATAKQHS-------LTVATRDTGSFFAADVNPWHL- |
5 | 4xgqA | 0.10 | 0.06 | 0.55 | 0.50 | HHpred | | MVIDTSALVAMLSDEPD-AERFEAAVEAD-HIRLMSTASYLETALVIEARFGE------P---GG--------------------------R----ELD---------------------------LWLHRA-AVDL-VAVHADQADA-ARAAYRTYGKGRHR-------A------------GLNYGDCFSYGLAKIS-------GQPLLFKGE--DFQHTDIAT--- |
6 | 4uy3A | 0.12 | 0.08 | 0.69 | 0.37 | MRFsearch | | ------------SNKRQIIEKAIERKNEIETKLNLKGETKTKYDAMKKDNVESTNKYLAPVEEKIHNANASQSEIDDANE--LMDSYEQSYQQQLEDVNEIIALNDELYDKCKVD---------YREMKRDVLANRHQFGEAASLLETEIEKFEPRLEQ---------------------YEVLKADGNYVQAHNHIAALNEQ-------------------------- |
7 | 4iggA1 | 0.12 | 0.09 | 0.78 | 0.77 | FFAS-3D | | --------------SQFLKEELVAAVEDVRKQGDLMKAAAGEFADDRGNMVRAARALLSAVTRDVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGIL----------QKNVPILYTASQACLQ-------------------HPDVAAYKANRDLIY-KQLQQAVTG-----ISNAAQATASDDASQHQGGG-- |
8 | 4uosA | 0.13 | 0.10 | 0.77 | 0.73 | SPARKS-K | | --------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEDSEKILKKAKEMALKMVIELAEKILKKAKEMAEKILKKVKELGVDN------EEVKKMLEKMIEEKMLEKAIKEMLEKMIKEIKKMLEN---------GEDSEKILKKAKEMAEKLKMVIELAEKILKKAKEMAEKILKKVKELGVG------------ |
9 | 2j68A | 0.08 | 0.06 | 0.69 | 0.59 | CNFpred | | -----DSLNTFLTR-ERAIAELRQVRTLARLACNHTREAVARRIPLLEQDVNELKKRIDSVEPEFNKLTGIRDEFQKEIINT----RDTQARTISESFRSYVLNLGNTFENDFLRYQPEL-EQYITDKSAAWTLT------AEKDINAAFKELSRSASQY-----------------------------GASYNQITDQITEK-------------------------- |
10 | 1p49A | 0.10 | 0.08 | 0.76 | 0.83 | DEthreader | | FMTGPMA-GVFLFTASSCKTDFCHHPLHHGFNY------G--LT--NLRDCGSVFTTGFKLVFLPLQVGVTLLTLAALNCLGL---LHVP-LGVFFSLLFLAALILTLFLGFLHYFRPLN-CFMMRNYELEA-FLLVLLIYFT--S--------------------K-NNWEGGRVPGI--------P-TSNMDIFPTVAKLAGAPLPRI---NAYLHTTLPEVP---S |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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