Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | NPDFLIDGKPFDCYAPDVNTSINNICRTITKKTKKQAERIVLNLDDYPIEKVDELIENISRKANPNGDLKHLQELFIVKDGKI |
1 | 3pdiB | 0.08 | 0.07 | 0.92 | 1.17 | DEthreader | | -LILGL--ARSMPLFHGSSGADENVVEALKTICERQPSVIGLLTTGSEGCDLHTALHEFRTQY----EEYKDVPIVPVNTGAA |
2 | 4g6vA | 0.28 | 0.25 | 0.92 | 1.17 | DEthreader | | SEPDYTNGQVFDNYAPA-TGNVRNIATTISNKVSGQASNIVVNLADSSA-SPAAIEAQINSYP----IP-GLGKVIVIDKLGI |
3 | 4g6vA | 0.36 | 0.33 | 0.92 | 2.25 | HHpred | | NPDYTINGQVFDNYAPAT-GNVRNIATTISNKVSGQASNIVVNLADSSAS-PAAIEAQINS-----YPIPGLGKVIVIKLGNI |
4 | 1hf2B1 | 0.06 | 0.05 | 0.86 | 0.59 | DisCoVER | | VDFKMTKEGLVLLIKD--YQNLEEVLNAISARFAKGDRISLMIENHNKHQDIPRIVSHL-------RNLGLEVSQILVGS--- |
5 | 4g6vA | 0.33 | 0.29 | 0.88 | 1.32 | MRFsearch | | NPDYTINGQVFDNYAPAT-GNVRNIATTISNKVSSQASNIVVNLADSSA-SPAAIEAQINSY-----PIPGLGKVIVIDK--- |
6 | 4g6vA | 0.34 | 0.31 | 0.92 | 1.32 | SPARKS-K | | NPDYTINGQVFDNYAPAT-GNVRNIATTISNKVSSGASNIVVNLADSSAS-PAAIEAQINSY-----PIPGLGKVIVIKLGNI |
7 | 4g6vA | 0.31 | 0.28 | 0.90 | 0.87 | MAPalign | | -PDYTINGQVFDNYAP-ATGNVRNIATTISNKVSGQASNIVVNLADSSA-SPAAIEAQINSY-----PIPGLGKVIVIDKLGN |
8 | 4g6vA | 0.34 | 0.31 | 0.92 | 1.15 | CEthreader | | NPDYTINGQVFDNYAPAT-GNVRNIATTISNKVSGQASNIVVNLADSSAS-PAAIEAQINSY-----PIPGLGKVIVIDKGNI |
9 | 4g6vA | 0.36 | 0.33 | 0.92 | 1.02 | MUSTER | | NPDYTINGQVFDNYAPATG-NVRNIATTISNKVSSQASNIVVNLADSSAS-PAAIEAQINSY-----PIPGLGKVIVIKLGNI |
10 | 4g6vA | 0.36 | 0.33 | 0.92 | 1.02 | FFAS-3D | | NPDYTINGQVFDNYAPATGN-VRNIATTISNKVSGQASNIVVNLADSSAS-PAAIEAQINSY-----PIPGLGKVIVIKLGNI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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