Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | RDVAYIVVCPENEALLEGAKTFFRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLAEELVSEWFNQPWGSEESDNHSRLKLYAQVCRHHLGFSGSVGAQNPSAGASSAERTQGNIGCGGDTEPGQSSSQPSQDGQESVTERERIGIPTEPDSADSQAYPPAVVIYMVDPFTYTAEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTMKDEQVFYIQYLKSMAFSVYCQCRR |
1 | 5xi0A | 0.08 | 0.06 | 0.68 | 0.83 | DEthreader | | PKRVLVVG------SSSGYGLSSRITAAFGG----GASTIGVSLAKVYSLASPV--RKMPETGE-I----KPIPATEQEIKDTVTVGGEDWELWINAL-S--------------------------------------------------EAG------V-LADGCKTVAYSY-I-GTELTWWDGLGQAKMDLDRAATALNE-KLSAT-GGTANVAVLKSVVTSYIAVFMHEGQEQILRMFSQRLYAA-- |
2 | 3fvwB | 0.07 | 0.05 | 0.71 | 0.69 | CEthreader | | KRILFIVGSFSEG---SFNRQLAKKAETIIGDRAQVSYLSYDR------VPFFNQDLETSVHPEVAHAREEVQEADAIWIFSPVYNYAIPGPVKNLLDWLSRSLDLSDPTGPSVLQ-----------------------------------------------DKIVTVSSVANGAS------------PEEVFEDYRSLLPFI-----RHLVDQLTGVPINSEAWSTGILKVSAEKLAELSAQADALLS |
3 | 3kegB | 0.07 | 0.05 | 0.75 | 0.53 | EigenThreader | | SRILAVHASPRGE--RSQSRRLAEVFLAAYREAHPQARVARREV----GRVPLPA-----------------------------------------VTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDYNFSVPSGLKAWIDQIVRLGVTFRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTAL--------GFIGIDEVTVVAAEGE-----ESFEDSCDEAEQRLLALARS--- |
4 | 2pffB | 0.14 | 0.10 | 0.74 | 0.52 | HHpred | | ---LAAKLLQENDTTLV----KTKELIKNYITARIMAKRPFDKKSNSLFRAVGEGNAQLVGQGNTDDYFEELRDYYHVLVGDLIKFSAETLSELIRTTL------------------DA--------------------------------------EKVFTQGLNILEWLENPSNTPDKDYLLSIPISCVIQLAHYVVTAKLLTPELKGAHSQGLVTAVAIAETDSW-ESFFVSVRKAITFIGV-RCYE |
5 | 4ei1A3 | 0.09 | 0.04 | 0.48 | 0.58 | MRFsearch | | --WAIACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQG------QPCFCKYA-------------------------QGADSVEPMFRHLKNTYA-------------------------------------------------------------------GLQLVVVILP------------GKTPVYAEVKRVGDTVL--------GMATQCVQMKNVQR-------TTPQTLSNLCLKINVK--- |
6 | 5awhA2 | 0.11 | 0.06 | 0.59 | 0.58 | FFAS-3D | | RSPRILVVYP--SSTQGKVENFLSAFRD--------GMGSNYSGFSKGFVDLMGLTKVEFVMCPV-----EVSSADRNGAHTKYNSAIEDKLAG------------------------------------------------------------------AGEVHAGIVVLFEDHARLPDDRN---------PYIHTKSLLLTL------GVPTQQVRMPTV----LLEPKSLQYTLQNFSIATYAKL-- |
7 | 6to1A1 | 0.07 | 0.06 | 0.87 | 0.68 | SPARKS-K | | VPVDVVMVIDQSKSAIASGQRFVKKML------------PKGMATEGALVSYDHEPHRTKDTAFLCQKIRALTPIWGTHTQGGLKMARNIMDKHIATEQYPVKNVTTADFIGETGNANDSNNPSTPLTPNYPTHSSKVGRRNLPESKFDYSNLSARITFDGVAGALVYE---------PRFPHPYYYYFPCNAAINEAQFAKNSG------YTIHTIGY------DLGDFALANNSLKLTATDENHFFTA |
8 | 1h78A | 0.08 | 0.06 | 0.70 | 0.68 | CNFpred | | --PFTNCCLVDLKGMLESIGVATAIMAQITAQVA--------SHQYGGTTFANDKVLSPYVKRTYAKHIEDAEKWQIADALNYAQKTEKDVYDAFQAYEYEVNTLFSSN------------------------------------------------------TPFVTITFGTG-------TDWTERMIQKAILKNRIKGLGRDGITPIFPKLVMFVEEGVNLYKDD-----PNYDIKQLALECASKRMY |
9 | 4qlbA | 0.07 | 0.04 | 0.64 | 0.83 | DEthreader | | EGRFVFECAWEVNKIYTVLRSKAQISTE-EL-----GDQYCMPIYGRKVILF---DLGSGA-VKMNEWKHFIGIPHEDIESNDAVILGFMVALFLKHFRESVT---------------------------------------------------------SY-TPLVVAHFHE------------W-QAG-VGLLMTRLWKL------D--IATVYTTHAVNGWGYTPAELLDWQNLGVFYRDCRRLLEV |
10 | 1p60A | 0.08 | 0.07 | 0.90 | 0.48 | MUSTER | | TRIKKISIENI-STFVNILKQLCEDWEVVPEPV--ARWCNVQSTQD-------EFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWT------IYQDWHDWMNNQFGQSLELDGIIYLQATPETGRNEEQGIPLEYLEKLHYKHESWLLHTNFDYLQEVPILTLD-------VNEDFKDKYESLVEKVKEFLSTL-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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