Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KRDDVLVSALSVEWIAKNVFLVAVPSYRRKVSCELTAVDGPRGTAPALTERVCDVLQRVNSAMRLYLRQDFYSNFPLEGYGDVIFSAETKQDTPYELHWCSLQETLVRAGVACVVRPSVIRQEALLQAEEEPTQEVKSSGASSWLHELQQREHSPLFCL |
1 | 6xsbA | 0.06 | 0.04 | 0.67 | 0.77 | DisCoVER | | LHKEPATLI-KAI-DGD-TVKLMYKGQPMTFRLLLVDT-PEFN-EKYGPEASAFTKKMVEKIEVEFD---KG--QRTDYGRGLAYIYADGK-----MVNEA---LVQGLAKVAYVGNN-T--------------------------------HEQLLR- |
2 | 5yijA1 | 0.09 | 0.06 | 0.73 | 0.83 | DEthreader | | GV-HHGHTLRTMAYAE--LIV-----------EEARATLGKFKDRESTPHVLINQGHMVDLV------------------------R-VKQP---ESFLQRYFSSMQRWIGATAVGIQQFFHATYERLNSLRARCENDVD-FCLKQLQTAHDKAKIEPK |
3 | 4qmgA2 | 0.12 | 0.10 | 0.86 | 0.72 | CEthreader | | SHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTLSGIKCPTFRRTPEPFAAEAKFFTESRLLQRDVQIILESCHNQ---NILGTILHPNG-----------NITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVAPT-------- |
4 | 2gjgA | 0.09 | 0.07 | 0.76 | 0.67 | EigenThreader | | DRSHRFQSY--VVHVDRNTLALDEIPGHRCYSGPLVTYHQR---RNAFRAALNVEDRLQ-----LGQVYERFKNPLGLVDTVELRHLHYERINTTFAGVRFHN----------------------------LSGQAQRKIESFVYQLQREARRFDKDDY |
5 | 7r1rA | 0.09 | 0.07 | 0.75 | 0.37 | HHpred | | ---------------------LQIALPGEIALCTLSAFNLGAINLDELEELAILAVRALDALLDY-------QDYPIINFAYYLAKHGKRYSDGSANNLHKTFEAIQYYL---------LKASNELAKEQGACPWNEEPLHYDWEALRESIKTHGL--- |
6 | 6xsbA | 0.20 | 0.14 | 0.69 | 0.45 | MRFsearch | | --------ATLIKAIDGDTVKLMYK--GQPMTFRLLLVDTPEFNEKYGPEASAFTKKMVENAKKIEVEFD-----RTDKYGRGLAYIYA--------DGKMVNEALVRQGLAKVAYVYNTHEQLLRKAEAQSK-------------------------- |
7 | 2wacA2 | 0.10 | 0.07 | 0.70 | 0.48 | FFAS-3D | | --------------------ITETLTFFAQTEYALALVALPTD--NEDKEEALRAFSEDVLNHKVQLNVELKV----TGSPNLATLRDPTTKV-------DFGKQLVAEGLVLAEQRGERKLKELVDQYKAAQEAARVAHLAIW--------------- |
8 | 6wvsA | 0.16 | 0.14 | 0.87 | 0.51 | SPARKS-K | | --DILIVNATDVDEMLKQVIAVVSDDWRKK-GGDILIVNATD------VDEMLKQVEILRRSDDWRILQEALKK----G-GDILIVN-----ATDVDEMLKQVEILRRLGAKQI-AVVSDDWRILQEALKKGGDNATDVDEMLKQVEILRRLGAKQIAV |
9 | 1wd5A | 0.14 | 0.11 | 0.81 | 0.46 | CNFpred | | LEAPVVLGLPGVVVAD-ELDVVLVRKVGANPEFALGAVGEG-ADQSYLEREAARQRDVLRKRAERYRRV--RPKAARK-GRDVVLVDDG----ATGASMEAALSVVFQEGPRRVVVAVPVAS-------------------PEAVERLKAR--AEVVAL |
10 | 4w8yA1 | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | | ---V-LHDP--KALKI--HERSILQDKVA-----RYTEKIDRSRGRFVNEFLERVSKLEGDVLKEVDAWAYIWQ---FYPVKLK--------------E-GVKEFAKLKLFEFNLPAAIWTHLDLTSALSVKDP--TLLRIIHVIYSVISQALNFESLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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