>PF18145 (193 residues) RANFGDKIKQKQEKGIIKHLSVFGLAPQPLLILLGSLLGDLHPTEVYQLHREPKTWKWLN ETDEVTFEVIKPQNSYSTIALVFALSATITEDRIVTVLGEECSIWTFTVNKPNNDFLRNR EQLTRFRTELRLLLNEIKAHHGQNNLIHVFPAMPNAMAIELGRVRMPKADLPMLVYDQNF QNPAGGFYPTIKI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RANFGDKIKQKQEKGIIKHLSVFGLAPQPLLILLGSLLGDLHPTEVYQLHREPKTWKWLNETDEVTFEVIKPQNSYSTIALVFALSATITEDRIVTVLGEECSIWTFTVNKPNNDFLRNREQLTRFRTELRLLLNEIKAHHGQNNLIHVFPAMPNAMAIELGRVRMPKADLPMLVYDQNFQNPAGGFYPTIKI | |||||||||||||||||||
1 | 6vm5A | 0.16 | 0.13 | 0.83 | 1.17 | DEthreader | IKKAVSIGDFIHNSGDRRTLLIDGKQRMSTACMLGYVFSRNFLLEIEHN-----GLAY---QKEQFFNKTNSIELKTEAIVTIGFPTAIG--------N--LPRLNLES-SN---VIDNMETLNLAVKEAKSALVSFK---A--SKLHLFIKAPSVFAMVLGHRLNG-V-CNIQLYDWV--N-GE-YMPTAEL | |||||||||||||
2 | 6vm5A | 0.15 | 0.12 | 0.84 | 1.17 | DEthreader | IKKAVSIGDFIHNSGDRRTLLIDGKQRMSTACMLGYVFSTRNFLLEIEHN----GLAY-K-KEGQFFNKTNIELHKTEAIVTIGFPTAIG---------N-LPRLNLES-SN---VIDNMETLNLAVKEAKSALVSFKA-----SKLHLFIKAPSVFAMVLGHRLNG-V-CNIQLYDWV-NG---EYMPTAEL | |||||||||||||
3 | 6vm5A2 | 0.16 | 0.14 | 0.87 | 2.72 | HHpred | IKKAVSIGDFIHNSGDRRTLLIDGKQRMSTACMLGYVFSATRNFLLEIEHNG-LAYRTDDHKQGQFFNKTNSLHGKTEAIVTIGFPTAIG----------NLPRLN----LESSNVIDNMETLNLAVKEAKSALVSFKA-----SKLHLFIKAPSVFAMVLGHRLN--GVCNIQLYDWV--N--GEYMPTAEL | |||||||||||||
4 | 6vm5A2 | 0.10 | 0.09 | 0.85 | 1.96 | DisCoVER | WNSLIKKAVSIGDFIHRRTLLIDGKQRMSTACMLGYVFSATNFLLEIEHN--GLAYRTDHKQKEQFFNKTIL-HGKTEAIVTIGFPTAI----------GNLPRLNLESS-N---VINMETLN-LAVKEA---KSALVSFKA--SKLHLFIKAPSVFAMVLGHRLNG--VCNIQLYDWV---NGEYMPTAEL- | |||||||||||||
5 | 6vm5A2 | 0.15 | 0.13 | 0.85 | 1.35 | MRFsearch | --KAVSIGDFIHNSGDRRTLLIDGKQRMSTACMLGYVFSATRNFLLEIEHN-GLAYRTDDHKEGQFFNKTNSIEGKTEAIVTIGFPTAIG----------NLPRLNLE----SSNVIDNMETLNLAVKEAKSALVSFK-----ASKLHLFIKAPSVFAMVLGHRLNG--VCNIQLYDWVN----GEYMPTAEL | |||||||||||||
6 | 6vm5A2 | 0.16 | 0.13 | 0.87 | 1.65 | SPARKS-K | IKKAVSIGDFIHNSGDRRTLLIDGKQRMSTACMLGYVFSATRNFLLEIEHNG-LAYRTDDHKEGQFFNKTIELHGKTEAIVTIGFPTAI----------GNLPRLNLESSNV----IDNMETLNLAVKEAKSALVSFKA-----SKLHLFIKAPSVFAMVLGHRL--NGVCNIQLYDWVN----GEYMPTAEL | |||||||||||||
7 | 6vm5A2 | 0.16 | 0.13 | 0.85 | 1.32 | MAPalign | IKKAVSIGDFIHNSGDRRTLLIDGKQRMSTACMLGYVFSARFLLEIEHNGL---AYRTDDHKQKQFFNTNSIELGKTEAIVTIGFPTAI----------GNLPRLNLES--SN--VIDNMETLNLAVKEAKSALVSFK-----ASKLHLFIKAPSVFAMVLGHRLNG--VCNIQLYDWV----NGEYMPTAEL | |||||||||||||
8 | 6vm5A2 | 0.15 | 0.13 | 0.87 | 1.34 | CEthreader | IKKAVSIGDFIHNSGDRRTLLIDGKQRMSTACMLGYVFSATRNFLLEIEHNGLARTDDHKQKEGQFFNKTIELHGKTEAIVTIGFPTAI----------GNLPRLNLESS----NVIDNMETLNLAVKEAKSALVSFKA-----SKLHLFIKAPSVFAMVLGHRL--NGVCNIQLYDWV----NGEYMPTAEL | |||||||||||||
9 | 6gneA | 0.13 | 0.11 | 0.86 | 0.46 | MUSTER | ---------------SGLYVVHIAMAPGDVVAGLGKALQRKHLVEIILPKYDCMQYDRVRDLRALDTVVESYFDGKLYKNKIWIGTVE------------GLPVHFIEPQHPSKQFYGEQDDFRRFSYFSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLARICFTCHNFEYQGTASASELGS | |||||||||||||
10 | 6vm5A2 | 0.17 | 0.15 | 0.86 | 4.65 | HHsearch | IKKAVSIGD-FIHSGDRRTLLIDGKQRMSTACMLGYVFSATRNFLLEIEHNG-LAYRTDDHKQEQFFNKTNSLHGKTEAIVTIGFPTAIG----------NLPRLN----LESSNVIDNMETLNLAVKEAKSALVSFKA-----SKLHLFIKAPSVFAMVLGHRLN--GVCNIQLYDWV--N--GEYMPTAEL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |