Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | DVTYFGVNKHPSIHDMIDISEEVFVPYDQVFHRFSELRIINHERCEKNDTCERVSKYFISKIGYNGLLTENTVAMMHHEFKNFIHLGPMTDTGRIHLIVDKLDLAPDTVRKFYYKWFIK |
1 | 4bojA | 0.04 | 0.03 | 0.92 | 0.83 | DEthreader | | PKMFWKHQDAVEAELWELVMDAYQLK--QI-DDVYDGTVAKYGWNPFNDD-IMWWAMARDALYDKDEYLNAATKIFRWGKMLTVFDDATHYNQGTY-GS----GLYKA-YLDAVKAAKF |
2 | 5e75A | 0.07 | 0.07 | 0.93 | 1.00 | DEthreader | | V-ANIIARLMCAFYMLIWGPVILLNREEDVFQFIINDLNYADNSWAAKG-ILAKVYLARSGWNN-GGTRLGNNSTLDDIIRERRVEFGMSNWYDMVTWFR-Y-LP-DKMLNYFNN-QW- |
3 | 5z6zA | 0.11 | 0.10 | 0.88 | 0.70 | HHpred | | -RACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---------QHRRESPEGRRKRTAVTGSQTALLLRAFEK----DRFPGIAAREELARETGLPESRIQIWFQNRRAR |
4 | 5palA | 0.07 | 0.04 | 0.63 | 0.64 | DisCoVER | | GFDYKRLKTDAQVKEVFEILDQSGFIEEEE----------------------L--KGVLKGFSAHGRD--LNDTETKALLAAGDSDDGKIGADEFAKMVAQ------------------ |
5 | 5z6zA | 0.12 | 0.10 | 0.81 | 0.57 | MRFsearch | | --ACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQ-----------------RRKRTAVTGSQTALLLRAFEKDRFP----GIAAREELARETGLPESRIQIWFQNRRAR |
6 | 5z6zA | 0.13 | 0.11 | 0.85 | 0.69 | SPARKS-K | | LRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHEGR--------------RKRTAVTGSQTALLLRAFEKD----RFPGIAAREELARETGLPESRIQIWFQNRRAR |
7 | 1zaoA | 0.09 | 0.09 | 0.99 | 0.76 | MAPalign | | HSWRIMDAIDYEYVPLQLISSHARIGEEKARNILKYLSDLRVVQNRQYEGSTLSLYSLHFGECVVKFHSVLAIRSARNEFRALQKLQGLAVP-KVYAWEGNAVLMPDEVLDMILEEVAK |
8 | 2pjpA | 0.06 | 0.05 | 0.84 | 0.85 | CEthreader | | IWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRY----------------YRNDRIVEFANMIRDLDQECGSTCA---ADFRDRLGVGRKLAIQILEYFDRI |
9 | 5z6zA | 0.12 | 0.11 | 0.87 | 0.81 | MUSTER | | ERACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSR----------QLRQHRRESPEGRRKTAVTGSQTALLLRAFEK-----RFPGIAAREELARETGLPESRIQIWFQNRRAR |
10 | 5z6zA | 0.11 | 0.10 | 0.88 | 0.79 | HHsearch | | LRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR----------QHRRESPGRRKRTAVTGSQTALLLRAFEK----DRFPGIAAREELARETGLPESRIQIWFQNRRAR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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