>PF17822 (230 residues) MAKTRGYCVQCWMQIYHYFVGLYRRLQKFWNVTVKHLFMKKKEEEDISSAESIFHKEKIV VLGHLLKNESLAIEKRAQAAYRIGLLAFTGGPTAGKFAAEYMKEVAHLLKGHKMPPKVKV LLLQSVACWCYLNPVSQKRAKHLKLIPILTEIFEDKLDSTIKSEINSSLLVKFWTCYVLS VMTCNNLSCIKELKDCHPLKYHLQILANENWSGWPENFAEVLYFLIGFHR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MAKTRGYCVQCWMQIYHYFVGLYRRLQKFWNVTVKHLFMKKKEEEDISSAESIFHKEKIVVLGHLLKNESLAIEKRAQAAYRIGLLAFTGGPTAGKFAAEYMKEVAHLLKGHKMPPKVKVLLLQSVACWCYLNPVSQKRAKHLKLIPILTEIFEDKLDSTIKSEINSSLLVKFWTCYVLSVMTCNNLSCIKELKDCHPLKYHLQILANENWSGWPENFAEVLYFLIGFHR | |||||||||||||||||||
1 | 6swy5 | 0.06 | 0.05 | 0.81 | 1.17 | DEthreader | ----------------------------------------T-MNNPVLTTLAHVIFCILSRFAQCLSLPQHNLKTTTKFIKICASFAASD-EKYRLLLLDLLNHLEYGLESHLYDHDFVAAWLLLLKSFSRSVSALRTTLKRNKIAQLLLQILSKTLCYFGQDFMKPEIMIMGITLGSICNFVVEFSNLQSFMLRNG-IIDIIEKMLDLFPVHEVKANSLWVLRHLMLLL | |||||||||||||
2 | 5dlqB | 0.07 | 0.06 | 0.82 | 1.17 | DEthreader | --------------------------------------ADTEGSILRANILLGGFWEVLQPLQQRFLRIQEVKQEITATLEALCGIAEATNVILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQILKAMHLYE-ACLTLLQVYSKNNLRQRIDTAEEEQYQDLLLIMELLTNLLSKVSA-ADVVLYGNLILPL-MSQDLLKFPTLCNQYYKLITFICFPAP | |||||||||||||
3 | 5z8hA | 0.11 | 0.10 | 0.88 | 1.12 | HHpred | -----------HHHMLHLLEQIRAYCETCWEW-QEAHEPNPMVEHQLSFRHAMNELGGLQAIAELLQVDCESITLRRYAGMALTNLTFGDVANKATLCKGCMRALVAQLKSE--SEDLQQVIASVLRNLSWRADNSKKTLREVGSVKALMECALEVKKE----------STLKSVLSALWNLSAHCTENKADICADGALAFLVGTLTYRSQTNTLASGGGILRNVSS--- | |||||||||||||
4 | 1ialA | 0.06 | 0.05 | 0.74 | 0.65 | DisCoVER | -------------DEQM-L---K--R--RN--VSNQGT--------V------NW--SVEDIVKGINSN--NLESQLQATQAARKLLSREKQPPIDNIIALIPKFVSFLGK-TDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL-------A---SPHA-HISEQAVWALGNIAGDGSAFRDLVIKH-GAIDPLLALLLACYLRN---LT-WTLSNLCRN- | |||||||||||||
5 | 1wa5B | 0.09 | 0.07 | 0.82 | 0.27 | MRFsearch | ---PEYRRTELRRRRDTQQVELRKAKRDEALAKRRN-------------------FQELPQMTQQLNSD--DMQEQLSATVKFRQILSRRPPIDVVIQAGVVPRLVEFMREN-QPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYT-----------GSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLC---- | |||||||||||||
6 | 1wa5B | 0.16 | 0.14 | 0.90 | 1.00 | SPARKS-K | AGDSTDYRDYVLQCAMEPILGLFNSLIRTATWTLSNLCRGKK-----PQPDWSVVSQALPTLAKLIYSM--DTETLVDACWAISYLSD-GPQEAIQAVIDIPKRLVELLSHE--STLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPK-----------ENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAE-YKTKKEACWAISNASSGGL | |||||||||||||
7 | 2z6gA | 0.10 | 0.10 | 0.98 | 0.63 | MAPalign | HAVVNLINYQDDAELATRAIPELTKLLVNKAAVMVHQLSLSNLTCNNYKNKMMVCQVGIEALVRTVLRAGDREDITEPAICALRHLTSQDAEMAQNAVRYGLPVVVKLLH-PPSHWPLIKATVGLIRNLA-LCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEACTGALHILA-RDIHNRIVIRGL-NTIPLFVQLLYSPIENI-QRVAAGVLCELATYA | |||||||||||||
8 | 4hxtA | 0.12 | 0.11 | 0.93 | 0.39 | CEthreader | IASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARAANIASGPDEAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALANIASGPDEAIKAIVDAGVEVLVKLLTST--DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTD-----------SEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDS-EVQKEAQRALENIKSGGW | |||||||||||||
9 | 4rxhB | 0.13 | 0.12 | 0.90 | 0.68 | MUSTER | IAGDSPQCRDYVLSC--ALRPLLTLLGDSRKLSMLRNATW---RGKTPQPDWNTIAPALPVLAKLVYSLD--DEVLIDACWAISYLSDGSNDKIQAVIEAIPRRLVELLMHAS--TSVQTPALRSVGNIVTGDDVQTQVIINCGALPCLLSLLSSN-----------KDGIRKEACWTISNITAGNSAQIQSVIDANIIPPLIHLLSHADLKT--KEACWAISNATSGGL | |||||||||||||
10 | 1xm9A1 | 0.13 | 0.08 | 0.62 | 0.91 | HHsearch | -------------------------------------------------------GLTIPKAVQYLSSQDE--KYQAIGAYYIQHTCFQDESAKQQYQLGGICKLVDLLRSP--NQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNA----------EIQKQLTGLLWNLSS-TDELKEELI-ADALPVLADRVIIPF-SGWC--------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |