Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MVRMSRPLFLDWAWRPLCSPSQSLPLTYGPEGWILQWKGTCRQQTALHCPFDFPQAPLRGRHTLSQVPNKGHEKASAVQLPEKQGTDQSRRGPTSAVTKARTSYPESETFIVYLCSYFWNSSKGVYMSGKD |
1 | 2kb4A | 0.10 | 0.07 | 0.71 | 0.70 | DisCoVER | | PAGSALLVVKRGPNARFLLDQPTTTAGRHPESDIFLDDVTVS---RRHA-E------------FR-I----NEGEFEVVD-------VGSLNGTYVNRNA---------QVMQTGDEIQIGKFRLVFLAG- |
2 | 4ivfA | 0.01 | 0.01 | 0.83 | 0.83 | DEthreader | | --YTAPGYSIEYEVQK-----------NPNGRIPTINDNFGLVLSQGAILQYLADTY-D----HKFSYPAYYKTEYLIFQVA-EN--PIQGQN-TIYGVFEDILSKYLVYTADFALLGWAYRLILGKWYDS |
3 | 4qn3A | 0.11 | 0.11 | 0.98 | 0.43 | CEthreader | | GTIHDRTAFRGLISTPLGSPPIVSNSDFLCVGWSSTSCHDGIGRMTICVQGNNDNATATVYYDRRLTTTIKTWAGNILRTQESE--CVCHNGTCVVIMTDGSASSQAYTKVLYFHKGLVIKEEALKGSARH |
4 | 3u84A | 0.08 | 0.08 | 1.00 | 0.58 | EigenThreader | | HIQSTKLDSSGVAFAVVGACQALGLRDVHEDHAWVVFGPNGEQTAEVTCDRKMEVAFMVCAYDLGHLERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASRDEHIYPYMYLAGYHCRNRNVREALQAWA |
5 | 1fujA | 0.15 | 0.09 | 0.63 | 0.22 | HHpred | | LIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDP---PAQVLQELNVT-------VVTFFCRP-------------------------------------HNICTFVFGDSGGPLICD-- |
6 | 2pffB | 0.12 | 0.04 | 0.32 | 0.80 | MRFsearch | | ---------------------------------------------------------------------------------DDYGFKQGGGGGGGGQGSQEQGMGMDLYKTSKAAQDVWNRAD-------- |
7 | 6e5pI | 0.16 | 0.13 | 0.82 | 0.29 | FFAS-3D | | ------QVQLVQSGAVIKTPGSSVKISYNFRDYSIHW---------------VRLIPDKGFEWIGWIKPLWGAVSYARQLQGRRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCDYCYWCQG-- |
8 | 5a9qA | 0.12 | 0.11 | 0.92 | 0.71 | SPARKS-K | | TLVHVRLPPGFSASSTVEKPSKVHRALYSKGILLMAASENDNDILWCVNHD---TFPFQKPMMETQMTAGVDGHSWALSAIDTPLNKDHIPITDSPVVVQQHMLPPKKFVLLS--------AQGSLMFHKL |
9 | 3pcrA | 0.21 | 0.05 | 0.22 | 0.38 | CNFpred | | ------------------------------------------------------------------------------------GSDKQKAEVVE--------FLCHPEAATAICSAFYQS---------- |
10 | 4xzyA2 | 0.06 | 0.05 | 0.83 | 0.83 | DEthreader | | EYLLKAEVVGLVLTNHGPP--SSIKFGADDNWIWPR---------HTGDFSIFRRFFNISLGGVAMIMGFPG------TLDVYERKDFADSGRMPVA--FC-ATAYQRSIIVDIRYVLLVIDGQLDEMN-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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