>PF17744 (311 residues) MSFGAMDLGLNRMKLGSPQSLQSLEEEQQPETEAWRTYTDRRNILREFLTSDLSPHLLKR HHARMELLKKCSYYIEILPKHLALGDQNPLMLPSTMFQLIDPWKFQRMKKVGTAQTKIQL LLLSDLLEQLDRGRAKLVALLESHDTLPFLSCWDTVEQRLADLSAVMDNFLAMMVPGRLH IKHRLVSDIGATKIPHIRLMLSTKMPVMFDRKESVAHHDWASLRWFVTIQPAVPEQFELR FKLLEPRSQQERVQCGVIPVATCTFDIRNLLPSRTYKFTVKRAESYTLVYEPWRDSLTLK TKPAPPEGAHT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MSFGAMDLGLNRMKLGSPQSLQSLEEEQQPETEAWRTYTDRRNILREFLTSDLSPHLLKRHHARMELLKKCSYYIEILPKHLALGDQNPLMLPSTMFQLIDPWKFQRMKKVGTAQTKIQLLLLSDLLEQLDRGRAKLVALLESHDTLPFLSCWDTVEQRLADLSAVMDNFLAMMVPGRLHIKHRLVSDIGATKIPHIRLMLSTKMPVMFDRKESVAHHDWASLRWFVTIQPAVPEQFELRFKLLEPRSQQERVQCGVIPVATCTFDIRNLLPSRTYKFTVKRAESYTLVYEPWRDSLTLKTKPAPPEGAHT | |||||||||||||||||||
1 | 1ujtA | 0.10 | 0.04 | 0.35 | 0.55 | DisCoVER | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRQVQKELGDVLVRLHNPV--VLTPT--TVQ----VTWTVDRQ--PQFIQGYRVMYRQTSGLQ--ATSSWQNLDAKERSAVLVNLKKGVTYEIKVRPYFNEFQG--MDSESKTVRTTEESGPSS-- | |||||||||||||
2 | 4a01A | 0.08 | 0.05 | 0.68 | 0.67 | DEthreader | ATLVSGGMRGGITKAADVGAD---GK--ERNI-PEDD-N--NGDD---EIEPALKKQLVSTVGLWAGL-------TEYTVV-ANVI-GLAGYKSIIPFAIISIFVS--FAYGAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMHRIRERTDALDA-AG--T-------------------AAIG---------KGFAIGSAAVSALFGVTTVDVL------------------------VFIGL---IVGAMLPYW-------FSAMLVTPLVSLVSVQ------------PLNLIKMASLAFATHGLL | |||||||||||||
3 | 4plnC | 0.12 | 0.08 | 0.64 | 0.28 | CEthreader | --------------------------------------------------------------------GSDETRVPEVPSSLHVRPLVTSIVVSW-------------TPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPS--------SHYVITLKAFNNVGEGIPLYESAVTRPHTVPDPTP---------MMPPVGVQASILSHDTIRITWADNSLPKHQRYYTVRWKTNIPAN----TKYKNAQATTLSYLVTGLKPNTLYEFSVMVTKGR--RSSTWSMTAHGATASG------- | |||||||||||||
4 | 2dtgE2 | 0.08 | 0.05 | 0.57 | 0.65 | EigenThreader | ----------CENELLKFSWEPYW--------------------------PPDFR----------------DLLGFMLFYKEAPYQNVTEFDGVV--------------------------------------------------------------------------------DIDPPLRSNDPKSQGLKPWTQYAIFVKTLVPLDPI---SVSNSSSQIILKWKPPSDPNGNITHYLVFQAKGLKLPSEHRPFEKVVNKESLVISGLRHFTGYRIELACNQDTPEERCSVAAYVSARTMPEAKADDIV | |||||||||||||
5 | 2eddA | 0.15 | 0.05 | 0.37 | 0.77 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGFPT-SVPDLSTPMLPPVGVQAV------------ALTHDAVRVSWADNSVPKNVRLYTVRWRTSFSA----SAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRR--SSTWSMTAHATTYEASGPSSG- | |||||||||||||
6 | 5utkA | 0.16 | 0.06 | 0.39 | 0.35 | MRFsearch | ------SVLLN-----------------------------------------------------------REQYVRARVNT-------------------------------------------------------------------------------------------------EDLTAWTLSDILPPQPENIKISNIT---------------HSSAISWTILD-GYSISSITIRYKVQGNE----DQHVDVKIKNITQYQLKGLEPETAYQVDIFAEN--NIGSSNPAFSHELVTLPE------- | |||||||||||||
7 | 2eddA | 0.16 | 0.05 | 0.34 | 0.68 | FFAS-3D | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPDLSTPMLPPVGVQAVA------------LTHDAVRVSWADNSVPSEVRLYTVRWRTSFSASAKYK----SEDTTSLSYTATGLKPNTMYEFSVMVTKN--RRSSTWSMTAHATTYEASGPSS-- | |||||||||||||
8 | 3btaA | 0.09 | 0.09 | 0.98 | 0.68 | SPARKS-K | IFSGAVILLEFIPEIAIPVLGTFAVSYIANKVLTVQTIDNALSKRNEKWDELIRKKMKEALENQAEATKAI---INYQYNQYTEEEKNNINFNIDLSSKLNESINKAMININKFLNQCSVSYLMNSEDFDASLKDALLKYIYDNRGTLIGQVKDKVNNTLSRLLSTFTEYIKIINTSILNLRYELINIGSKVNFDKNQIQLFSKIEVILKNAIVYMYENFSTSFWIRIPKYFNSISWKVSLNTLQDTQEIKQRVVFKYSQMINISDYINRW--IFVTITNNRLNNSKIYINHASNNIMFKLDGCRDTHRYI | |||||||||||||
9 | 5g55A | 0.14 | 0.08 | 0.59 | 0.58 | CNFpred | --------------------------------------ENVRAIAVQKLE-SLEDDDVLHYLLQLVQAVKFEPYH-----------------DSALARFL----LKRGLRNKRIGHFLFWFLRSEIAQSQQRFAVILEAYLRGCGT-AMLHDFTQQVQVIEMLQKVTLDIKSLS-DVSSQVISQLKQKLENLLPESFRVPYDPGKAGALAIEKCKVMAKPLWLEFKCADTALSNETIGIIFKHGD------------------------------------------------------------------ | |||||||||||||
10 | 1yvlB | 0.05 | 0.03 | 0.63 | 0.67 | DEthreader | ---QWYEQYLAQWLEKQDWEHAANIMIYSCLKEERKILEN-AQ--------MLD-KQKELDSKVRNVKDKVMIE-I-------------------------------------------T------------------------------------------ACLDQLQNWFTIVAELQVRLK-E----------TKQLWTFFQLISFVVE-RQPCMLKFTVKLRLLVKLQELNYNLKVKVLKDVNERNFRK-NITHTKVMNAAEFRLQLKELHSLSFETQLCQ--PG--LVIDLETTSLPVVVISNVSLP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |