Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | TPPGWEPAPDAPWCPYKVLSEGPEAGGGRLCFRSPVRGFRCQTPGCVTLASAGGSLRAHVLRNRSVLLQWRLAPAEARRVRVFALNCSWRGTYTRFPCDRVLLGASCRDYLLPDVHDSVRYRLCLQPLPLPLRAELAAAPPELAECVEFTAEPAAMQEIVVAMTAVGGSICVMLVVICLLVAYITENLMHPTFRRPSLRRQP |
1 | 5e4sA1 | 0.11 | 0.05 | 0.46 | 0.58 | DisCoVER | | ---------------------------------------------------PPGPPEVTIDTDTTAQLSWRPGP-DNSPITMYVIQARTPFS-VGWQAVNTLVDGKTFTATVVGLNPWVEYEFRTVAANVIG---IG----EPSRPSEKRR-------T------------------------------------------- |
2 | 3lxuX | 0.06 | 0.05 | 0.82 | 0.83 | DEthreader | | VLFLYYDGAAVIVWVASAGNGAYVYTWTSVTV--------AAPHVAAVLILEYSSIKISAKVDPFGHGLAFHLTEHRQSKNLRFSVR-VG--N-N----------ADKGIHLRQGQSIDYNVYIEPIFY--DPKDKFNFNVRL-NLIAVRVDPTGLQPGVHSAV-IRASFEIP-VT---------QSCRKDLLYAEFESQQF |
3 | 3bpnC | 0.07 | 0.05 | 0.75 | 0.30 | CEthreader | | YTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVQHSVQIMVKDPSFNIVPLTHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTHNVFYVQEAKCEENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGK--------------------------------------------------- |
4 | 3if8A | 0.06 | 0.05 | 0.78 | 0.75 | EigenThreader | | EEKKGIRKDPFEADVQVQISKGQPNNDIVFIVEKVPGPLALPALPPLWVRCDEGTCWLGAELINVLYVVSCKADRHHTSKGFAQYELFK---------------------------SQTAIALDISWSPVDEI--LQIPPLSSTATLNIKHLYRELKFLLVLADGLRTGVTE---------------WLEPLEAKSAVELVQ |
5 | 1zlgA | 0.16 | 0.14 | 0.88 | 0.59 | HHpred | | -----ILQDLSFSCKYKVQPIRPKSKAEAVFFTTPPKPIGCLGEALSKVLAKPENLSASFIVNITGHFSWKMAKALYQPMTGFQVTWAEVTTESRIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEG----P----ATIKTFRTPELPKHRHPHHYKERYGKP-I-------PNPLLGLDSTRTGHHHHHH---- |
6 | 4bk4A2 | 0.14 | 0.06 | 0.47 | 0.38 | MRFsearch | | ---------------------------------------------SVTVTTNIALVQAKEVTRYSVALAWLEPDRPNGVILEYEVKYYEKRSYRIVRTA-------ARNTDIKGLNPLTSYVFHVRARTAAGYGD-------FSEPLEVTTNT------------------------------------------------- |
7 | 2b5iB2 | 0.15 | 0.07 | 0.49 | 0.55 | FFAS-3D | | --------------------------------------------------MAPISLQVVHVETHRCNISWEIASHYFERHLEFEARTLSPGHTW-EEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQP---LAFRTKP------------------------------------------------- |
8 | 5e52A1 | 0.09 | 0.04 | 0.47 | 0.71 | SPARKS-K | | -------------------------------------------------PGPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTVKTVPITGDMESAMAVDLNPWVEYEFRVVATN--PTGDPSTPSRM------IRTN-------------------------------------------------- |
9 | 5li1A | 0.14 | 0.07 | 0.54 | 0.59 | CNFpred | | -------------------------------------------------------DLLRVIGRAKVLLVRLKK-----TDRIYAMKVVKK---ELVNDDEDIDWVQTEKHVFEQAS-NHPFLVGLHSCFQT------------ESRLFFVIEYVNGGDLMFHMQ-PEEHARFYSAEISLALNYLHER--------------- |
10 | 3prxB | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | | ---YTPGSPVLN----YVLP-VTVMVVT-----PGVAVDKAVVLN-KSITMKVFFIDLQMPYSVEIRAILHNYV--NE-DIYVRVELLYNPFCSSRYRQQFPIKSRAVPFVIVPLQGLHDVEIKASVQ--------EA--LW-SDGVRKKLKVVPEGV--VCNFHL----K-GTL-NKICINVCRCDLLP------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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