>PF17742 (202 residues) TPPGWEPAPDAPWCPYKVLSEGPEAGGGRLCFRSPVRGFRCQTPGCVTLASAGGSLRAHV LRNRSVLLQWRLAPAEARRVRVFALNCSWRGTYTRFPCDRVLLGASCRDYLLPDVHDSVR YRLCLQPLPLPLRAELAAAPPELAECVEFTAEPAAMQEIVVAMTAVGGSICVMLVVICLL VAYITENLMHPTFRRPSLRRQP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | TPPGWEPAPDAPWCPYKVLSEGPEAGGGRLCFRSPVRGFRCQTPGCVTLASAGGSLRAHVLRNRSVLLQWRLAPAEARRVRVFALNCSWRGTYTRFPCDRVLLGASCRDYLLPDVHDSVRYRLCLQPLPLPLRAELAAAPPELAECVEFTAEPAAMQEIVVAMTAVGGSICVMLVVICLLVAYITENLMHPTFRRPSLRRQP | |||||||||||||||||||
1 | 5e4sA1 | 0.11 | 0.05 | 0.46 | 0.58 | DisCoVER | ---------------------------------------------------PPGPPEVTIDTDTTAQLSWRPGP-DNSPITMYVIQARTPFS-VGWQAVNTLVDGKTFTATVVGLNPWVEYEFRTVAANVIG---IG----EPSRPSEKRR-------T------------------------------------------- | |||||||||||||
2 | 3lxuX | 0.06 | 0.05 | 0.82 | 0.83 | DEthreader | VLFLYYDGAAVIVWVASAGNGAYVYTWTSVTV--------AAPHVAAVLILEYSSIKISAKVDPFGHGLAFHLTEHRQSKNLRFSVR-VG--N-N----------ADKGIHLRQGQSIDYNVYIEPIFY--DPKDKFNFNVRL-NLIAVRVDPTGLQPGVHSAV-IRASFEIP-VT---------QSCRKDLLYAEFESQQF | |||||||||||||
3 | 3bpnC | 0.07 | 0.05 | 0.75 | 0.30 | CEthreader | YTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVQHSVQIMVKDPSFNIVPLTHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTHNVFYVQEAKCEENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGK--------------------------------------------------- | |||||||||||||
4 | 3if8A | 0.06 | 0.05 | 0.78 | 0.75 | EigenThreader | EEKKGIRKDPFEADVQVQISKGQPNNDIVFIVEKVPGPLALPALPPLWVRCDEGTCWLGAELINVLYVVSCKADRHHTSKGFAQYELFK---------------------------SQTAIALDISWSPVDEI--LQIPPLSSTATLNIKHLYRELKFLLVLADGLRTGVTE---------------WLEPLEAKSAVELVQ | |||||||||||||
5 | 1zlgA | 0.16 | 0.14 | 0.88 | 0.59 | HHpred | -----ILQDLSFSCKYKVQPIRPKSKAEAVFFTTPPKPIGCLGEALSKVLAKPENLSASFIVNITGHFSWKMAKALYQPMTGFQVTWAEVTTESRIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEG----P----ATIKTFRTPELPKHRHPHHYKERYGKP-I-------PNPLLGLDSTRTGHHHHHH---- | |||||||||||||
6 | 4bk4A2 | 0.14 | 0.06 | 0.47 | 0.38 | MRFsearch | ---------------------------------------------SVTVTTNIALVQAKEVTRYSVALAWLEPDRPNGVILEYEVKYYEKRSYRIVRTA-------ARNTDIKGLNPLTSYVFHVRARTAAGYGD-------FSEPLEVTTNT------------------------------------------------- | |||||||||||||
7 | 2b5iB2 | 0.15 | 0.07 | 0.49 | 0.55 | FFAS-3D | --------------------------------------------------MAPISLQVVHVETHRCNISWEIASHYFERHLEFEARTLSPGHTW-EEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQP---LAFRTKP------------------------------------------------- | |||||||||||||
8 | 5e52A1 | 0.09 | 0.04 | 0.47 | 0.71 | SPARKS-K | -------------------------------------------------PGPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTVKTVPITGDMESAMAVDLNPWVEYEFRVVATN--PTGDPSTPSRM------IRTN-------------------------------------------------- | |||||||||||||
9 | 5li1A | 0.14 | 0.07 | 0.54 | 0.59 | CNFpred | -------------------------------------------------------DLLRVIGRAKVLLVRLKK-----TDRIYAMKVVKK---ELVNDDEDIDWVQTEKHVFEQAS-NHPFLVGLHSCFQT------------ESRLFFVIEYVNGGDLMFHMQ-PEEHARFYSAEISLALNYLHER--------------- | |||||||||||||
10 | 3prxB | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | ---YTPGSPVLN----YVLP-VTVMVVT-----PGVAVDKAVVLN-KSITMKVFFIDLQMPYSVEIRAILHNYV--NE-DIYVRVELLYNPFCSSRYRQQFPIKSRAVPFVIVPLQGLHDVEIKASVQ--------EA--LW-SDGVRKKLKVVPEGV--VCNFHL----K-GTL-NKICINVCRCDLLP------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |