Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | PYPTSFAHIVELITTGQPIPGIKEIPDTVLEGQGSASTASKRKKPWEK |
1 | 5j7oA3 | 0.07 | 0.04 | 0.62 | 0.97 | DisCoVER | | NIASGSPIVALSDVNGTAVTGSPV--------NAAITA---------- |
2 | 6rtvA | 0.14 | 0.12 | 0.90 | 0.83 | DEthreader | | PSDACWRLSKYEIDNGNQV--QDEIVGNVKLVEDHHAHWADS-RSA-- |
3 | 3mc1A1 | 0.10 | 0.10 | 1.00 | 0.64 | CEthreader | | IIGDREYDVIGALKNNLPSIGVTFGSYEELKNAGANYIVNSVDELHKK |
4 | 3ppbA | 0.06 | 0.06 | 1.00 | 0.57 | EigenThreader | | KKQAILETALQLFVSQGFEAGLLEQLFLGVKQEFADAIQASVQDAEQL |
5 | 4c23A2 | 0.11 | 0.08 | 0.75 | 0.24 | HHpred | | GKAYSFDDIRTMVEKEKENLPLIDTESTEFATESDM------------ |
6 | 2h6eA2 | 0.23 | 0.12 | 0.54 | 0.57 | MRFsearch | | --LNDLEDVVRLSESGKIKPYIIKVPLG-------------------- |
7 | 5xtaA | 0.16 | 0.15 | 0.90 | 0.31 | FFAS-3D | | ---NTFQNIVDAIAEGKRITFVINL-KKCTSEPLNSAIVSVTPNAVV- |
8 | 5a1uD3 | 0.09 | 0.08 | 0.98 | 0.92 | SPARKS-K | | SLLVSVLEYQTAVMRRD-FSMADKVLPTIPKEQRTRVAHFLEKQGFKQ |
9 | 2xkjE | 0.14 | 0.06 | 0.44 | 0.33 | CNFpred | | -----ITQIADQMQA-KKLPLVVDVRD--------------------- |
10 | 6wy9A | 0.11 | 0.10 | 0.96 | 0.83 | DEthreader | | GYGEQYVLFDEVQRAGLPFPFVGLLGRMIYKLEAMLLNTKATH-LQG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|