>PF17732 (355 residues) LKPQENISRPIHPPLVITINFEEEEEEEEEEEDDKENNASSLWTKTPEEIEEERAIKEMC YKSGEYYRFHTPPDISAKSITSTVEKELAKPLENGNELQEGDGLTVPTKFNIFERQGEIK ASLDGKPRTDLAAFENGGGDCYVPQRIIFLGVDESETLTEENEFIMSKGSNNSKDIKDSP HPKRSVTTRPVPTTHVLNATENINTKCREDPSSMNDAQSARKPNFKGVKKKKWIYEEPKN PPGTGTRKATQAPNPKNKMSYQRNDKNRNAENASYVHVQRDTVRSVSLNSPARGRSANGT YNKVNVNKEPKLNLCPDKYTSTSYNASTWRKRIPFSKTYSKTEKIYSEPRRNGSK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LKPQENISRPIHPPLVITINFEEEEEEEEEEEDDKENNASSLWTKTPEEIEEERAIKEMCYKSGEYYRFHTPPDISAKSITSTVEKELAKPLENGNELQEGDGLTVPTKFNIFERQGEIKASLDGKPRTDLAAFENGGGDCYVPQRIIFLGVDESETLTEENEFIMSKGSNNSKDIKDSPHPKRSVTTRPVPTTHVLNATENINTKCREDPSSMNDAQSARKPNFKGVKKKKWIYEEPKNPPGTGTRKATQAPNPKNKMSYQRNDKNRNAENASYVHVQRDTVRSVSLNSPARGRSANGTYNKVNVNKEPKLNLCPDKYTSTSYNASTWRKRIPFSKTYSKTEKIYSEPRRNGSK | |||||||||||||||||||
1 | 6bx3B | 0.06 | 0.05 | 0.79 | 0.77 | DisCoVER | --PEKLTHTIENPLRTECLQ--------------------------------------FSPCGDYLALGCANGALVIYDMDTFRPICVPGAHVRPITSIAWSPGLLTSSRDWSIKLWDLSKKPLKEIRFDSPIWGCQWLVATIFEESDAYVIDFSNDPVASLLSKVLVCTVHTK-------H-PNIIIVGTSKGWLDFYKFHSLTECIHSLKITSNIKHLIVSNGERLAINCSIRQYEISIDENSAVELTLEHKYQWNCILFSNNTAEYL-VAS-T--HGSSAHELYIWET--TSGTLVRVLEGAEEELIDINWDFYSMSIVSNG-------FESGNVYVWS--V---------- | |||||||||||||
2 | 4txgA | 0.06 | 0.04 | 0.65 | 0.67 | DEthreader | WRGKPAYDILHIN-AFAHVDGSNK------------LSVNEAGNPAGHFNLTVKTLI--SV----GGW----------------------A-----ETGGYFD-----------KRVASGSMVNVNQINAFSSAVAFLFDGVDIDFEYPGNPLD-TFSNARLLNYVLQLRRLDAAAQDG--------METFQGLVVMSYLHGAWNRFVSGGWGSSGDGAVGIDNIWHDLEIPGGSNPWHAERLWNFLSTED------QSIAQK--------AAW-IDAN--NVGG--------------V---------M-FWELAGDY--------------YFIGTTTSLYNTFS--P--VS- | |||||||||||||
3 | 7cm1B | 0.07 | 0.05 | 0.79 | 0.66 | CEthreader | --------------------------------------------------PKYRMSRPTCRGQKWTVMSNVWTSRWVATGTNARNIRPPTAIFL-----KKGLRAVSLAHNTAGPNPLSGTGSDRSEFRDLITWSPSGYPGDESTETICKAWSFFACFDGKEDLIGCISGPDNNAVLTIMYGGKPTDLY---------------------NSYALDILRTMESQCVCNNGTCSAMITDGPDIGPSKARMLFIKEGKIEKVVIVDGPGSSMVEECSCINEDSNEFGCLCRDNTANSRRPFLKCFWDSRTCKADYTCSQTLLDCPRPNDSIQTCGTSFGSLAGGLKGAYIPLGKGRI | |||||||||||||
4 | 6gmhQ | 0.04 | 0.04 | 0.96 | 0.78 | EigenThreader | -GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQE--DYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRG------DKENASQCFPNNYETMKILGSLYAASEDDVEAWIELAQILEQTDIQGALS | |||||||||||||
5 | 6raoE | 0.14 | 0.10 | 0.68 | 0.40 | HHpred | -------------------------------------------------------------LPGVSYNETLTQASNPVTMP----------LFIGY-TPPPVTVMQPVSVGSANSLG----QRGTLAYSLRHFFENGGLQCYV------LPLGPGKGEPAAR------LQELIA----A--------LQTPQMLETLLADDKTGLVLVPELSELNQGWQVLLTLCRQAPQRFALLELPEDPASAVTQQSFSADQCQRGAAWWPRLETSYQDPVVLSPLRSAHDNGVWK--APANIALAKTTQSIL-TSQALLDNQSGCRT-LLNENTAWRY-IQIRLLVSSVEHYLS-------- | |||||||||||||
6 | 3jc5c1 | 0.19 | 0.04 | 0.19 | 0.57 | MRFsearch | -------------IQCFDDGDDTLGEEKEAYYKLLELNDLSKRKQRKKQIHEYEGVLEEYYSQGTTVVN----------SISAQIYSLLSA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 3cnfB | 0.12 | 0.10 | 0.90 | 0.50 | FFAS-3D | INGPASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNRYHESVLEIADIFDQADFIQTSDAVRQLR--ALMPTLSTSQIRHAIERIAQITDVDSTDYGKLGTLTRSLKMQNIRRIRPDGTVLRYDDQIDIEAFRWSRDELQLRRLSVGLRLITNPRIARFNGVRIMYLTDDDEGYVAVQYAHRLFSSSLANKRNRVTYTHPPTGMAYPSPTGINERAGMSKLVADSVIKSNWVVDYTQHVDAESIMTAPKGKLFHLQFMDGLLRPEASGEDMRLIYPLQPISVARSMRAIVNH------------NEVDR----PREMDTGTLSRNG-------DLLYS--------PVANGQ- | |||||||||||||
8 | 5kcs1w | 0.10 | 0.09 | 0.95 | 1.23 | SPARKS-K | SAEIVIKQKVELYPNVCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPLYHGSSNIGIDNLIEVITNKFYSSTHRG----PSELCGNVFKIEYTKKRQRLAYIRSGVLHLRDSVRVSEKEKIKVTEMYTSINCKIDRAYSGEIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQRDSDPLRYYVDSTTHEIILSFLGKSALLQEK--------YHVEIEITEPTV--IYMERPLKNAEYTIHIEVPPNPFWASIGLSVSPLPLSGMQYESSVSLGYLNQFQNAVMEGIRYGCEQGLYGWNV----TDCKICFKYGLYYSPVST | |||||||||||||
9 | 4j29A | 0.15 | 0.03 | 0.20 | 0.53 | CNFpred | ------------TVVIVVSRDERILEELLEVVLKSDPNVKTVRTDDKEKVK--EEIEKARKQGRPIVIFIRGA-------TEEVVRDIVEYA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5yz0A | 0.08 | 0.06 | 0.70 | 0.67 | DEthreader | --------------KSTDWSGVKKPIEAEIMAVLKHTLASFSYTLY-MHEPDGVAHESLGL-LRDATACY--------A-QLEPD--QIIHYH--GVVKSMLGL-GQLS-VIT--------DELNTYRVEAAW-KLSQ------SVLLLLVRAEQ-------MLCEL-EHS---IK--PLFQVARLEMT--------S-YRAKEPIL--A---FY-KYDKLMPVTDLRYIVLHFGRLQYNTYLAPYQFLTAFSPQQAMWMMTAVSKSSYPMR-VNRCKEILNKA-------------------------RKCRLMEFNSLINLHIRSAYCRSTAVMSMVYLGFNKETFE------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |