>PF17724 (204 residues) MMRQVASNTNDYCMSGRASCLAEDGRHAASHFDLCTSQPNKFYPPVPPPSLQLPLPPLPP LPQSAMKSMPCQRPDVRNEPHPQSVGLKNSDESEDPKKKKGMGRSGRRGRPSGTTKSAGY RTSTGRPLGTTKAAGFKTSPGRPLGTTKAAGYKVSPGRPPGSIKALSRLNKLGYGNCSGA AFPYTMMHKRGLCEPSGKEKEPNE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MMRQVASNTNDYCMSGRASCLAEDGRHAASHFDLCTSQPNKFYPPVPPPSLQLPLPPLPPLPQSAMKSMPCQRPDVRNEPHPQSVGLKNSDESEDPKKKKGMGRSGRRGRPSGTTKSAGYRTSTGRPLGTTKAAGFKTSPGRPLGTTKAAGYKVSPGRPPGSIKALSRLNKLGYGNCSGAAFPYTMMHKRGLCEPSGKEKEPNE | |||||||||||||||||||
1 | 2pffB | 0.13 | 0.08 | 0.60 | 1.40 | MRFsearch | ------------------------------------------------PDDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGMDLYKTSKAAQ--------------------------------- | |||||||||||||
2 | 5kcs1w | 0.15 | 0.15 | 0.97 | 1.26 | SPARKS-K | TSINGELCKIDRAYSGEIVILQNEFLKLNSV--LGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREMSDPLLRYYVDSTTHEIILSFLGKQEKYHVEIEITEPTVIYMERPLKNAEYTIHIEVPPNPFWAS--IGLSVSPL-PLGSGMQYESSVSLGYLNQSFQNAVMEGIRYGCEQGLYGWNVTDCK-ICFKYGLYYSPVSTP | |||||||||||||
3 | 2jwxA | 0.08 | 0.05 | 0.70 | 0.62 | DisCoVER | AEEAEQPG-ALAREFL--A-AME-------PEPAPAP----APEEWLD--ILLRKK-TLVP----GPPGSSRPVKGQ------VVTVHLQTSLENGRVQEEPELVFTLGDCDVIQALDLSVPLM--DVGET-AMVTADSKY-CYGPQGSRSPYIPPHAALCL--E------VTLKTAVDLE--H-------------------- | |||||||||||||
4 | 2z64A3 | 0.09 | 0.05 | 0.62 | 0.54 | CEthreader | -----------------------------------------------------------------------------FKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLLYSLSTLDCSFNRIETPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLVNVEQMTCATPVEMNTSLVLDFNN | |||||||||||||
5 | 3a79B | 0.07 | 0.06 | 0.93 | 0.57 | EigenThreader | LRDLSFNDFDVLP--VCKEFGNLTKLTFL--GLSAAKFRQLDLLPVAHLHERIDREEFTYSEVFLFSKEALYSVFAEMTPFIHMVCPPSPSSFTFLNFCSTLKRLQQRNGLKNFSSLETLDVSLNSLNSHAWAESILSSNMLTGSVFRCLPPKLHNNRIMSIP-------KDVTHLQALQAGS---VAPDSAKCSGSGKPVRSI | |||||||||||||
6 | 5eduB | 0.25 | 0.18 | 0.71 | 0.33 | HHpred | --------------TPRPATEAELTCHSAEYVGHLRANFDSIYICPSFACALNGAAVVRPPGHTHALRILIVDWDVHHGNGTQYVSLHRYD---HGTFFGDEGASSQIGR----AAGTGFTVNVGPRMGDAVSAGFDAARGDPLG-----GCQVSPE---G-YAHLHLLMGLASG----------------------------- | |||||||||||||
7 | 2pffA1 | 0.19 | 0.09 | 0.50 | 0.93 | MRFsearch | -----------------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKYVLITGAGKGSIGAEVLQGLL-------------------------------- | |||||||||||||
8 | 2nbiA1 | 0.19 | 0.19 | 0.97 | 0.35 | FFAS-3D | ---PEPSSAPSDCGEVIEECPTSDPARPPDDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGS--PPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQGDSSRPLDCTDPAVNRLPTPQNINCPACCAFECRPDNPMFTPSPDGSSPEPSSQPSDIDACFLCTAVGRPDCNVLPFPFECSPDNPMFTPSPDGSPPN- | |||||||||||||
9 | 3gavA | 0.11 | 0.10 | 0.96 | 1.14 | SPARKS-K | GFYPATRGNTAKCTSPAPRCTLKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSDEHFETPSGSYWDHIHCTQDGWSPAVPCLRKCYFPYLENGYNQNHGRKFVQGKSIDVACHP---GYALPKAQTTVTCMENGWSPTPRCIRVKTCSKNGFISESQYTYALKE-----KAKYQCKLGYVTADGETSGSITCGKDGWSAQPTC | |||||||||||||
10 | 1s4nA | 0.07 | 0.01 | 0.20 | 0.19 | CNFpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------GLLSSIKYVENKI---NKKFPYPWVFLNDEPFTEEFKEAVTKAV | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |