>PF17722 (233 residues) MPAQISDLEIMDEDQLIEEVLDKFVNCHEQTYEEFLSTFTHLSKEDNVTKRGAFGTDSSE NIFPSVKFAHENEPNDHHLRNKAVFLRTSSQCSEDEQIVIDEGQKVGSSFQGDLNRAGKV KVDNFLDLEDLDVDEETQPQMSKDLLLLPGEVEEDVCPRVPSYIPSAAQPFTPGVKPGPA GRGADKQTEEILGDEVQPFSLDEEFDYDAVMLTPKFTPAEIDAITELSKQERS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MPAQISDLEIMDEDQLIEEVLDKFVNCHEQTYEEFLSTFTHLSKEDNVTKRGAFGTDSSENIFPSVKFAHENEPNDHHLRNKAVFLRTSSQCSEDEQIVIDEGQKVGSSFQGDLNRAGKVKVDNFLDLEDLDVDEETQPQMSKDLLLLPGEVEEDVCPRVPSYIPSAAQPFTPGVKPGPAGRGADKQTEEILGDEVQPFSLDEEFDYDAVMLTPKFTPAEIDAITELSKQERS | |||||||||||||||||||
1 | 4s1kA | 0.10 | 0.07 | 0.70 | 0.71 | DisCoVER | VNEAPRAYDAN----ME--LV--IVAEGQCKS--F----HFA------NPFVIKGVIKSSELMWDI-------DNGHQMSEYELQRSINGYA-------------ASHSNRAINRIPKKLSFYLRGNVDKASIDIRGPTGKRKFVDLPSCCEKAWYPVSIAVIVPRNMHLDTV----------------PECTQWFDNAELYAYHASNYG-MTMLDQFSVI------------ | |||||||||||||
2 | 4a01A | 0.04 | 0.03 | 0.72 | 0.67 | DEthreader | I-AGMKIMGFLLAANGLYGGSSMALFG-------GS-AESSAYPIVSSVGICSTVWLIIGFVTYTPV-----IGLALGKSVIIPAIIS-FVSTFAAM--------YGIA---------VAALGMLIGLAIAYGISTALDAA--------------GNTTAAI-----GKGFIGALPYWFSAMKVSAASKEMIPPGALVMTPGVGSLGVQIAI----DPDTS--S--------- | |||||||||||||
3 | 1vt4I3 | 0.06 | 0.05 | 0.88 | 0.79 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------- | |||||||||||||
4 | 3fg0C | 0.10 | 0.09 | 0.96 | 0.58 | EigenThreader | ETAETRGKKVRAIADKIKEHARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGVVTQITLVMKPSEITPPKGTINLILGVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNDADFELAVDQALNGGYFHAGQVCSAGSDADTEMGPVISTEHRNKIESYM---------DVAKAEGAGKRPDRDDLKDGLFFEPTCDTSMRIVQEQEAIQLAND | |||||||||||||
5 | 6hxiB1 | 0.12 | 0.03 | 0.27 | 0.30 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------ILPMY-KTIPLAAEADVMVNFASHRSAFTTMEA---------LKE-DTIRVAVIAEGVPERQSRVMAATARKLDK | |||||||||||||
6 | 6mzcK | 0.09 | 0.04 | 0.48 | 0.32 | MRFsearch | ----------KASVETLTEMLQSYISETQPTLSDIVVTLVE-----------------------------------------------------------------------------VDTLPAYAKRSRMVITGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------------------------GGGGYQVLREKAASQRR | |||||||||||||
7 | 1nwxD | 0.13 | 0.09 | 0.69 | 0.37 | FFAS-3D | --------------------------------QQLKTKYNDQVRPALMQQFGYSSVMAVPRI-------------------EKIVVNEGLGSSKEDSKAIDKAAKELALITLQKPIITKAK-------KSISNFKLRQGMPVGIKVTLRGERMYV-------FLEKLINIGLPRIRDFRGINPNAFDGRGNYNLGIKEQLIFPEITYDTIVTTAK-TDEEARALLQ------- | |||||||||||||
8 | 6e5oY | 0.13 | 0.12 | 0.92 | 1.00 | SPARKS-K | KPEVMPQVISNNAANNLRMLLDDYTKMKEAILQVYWQEFKFAQPASKKIDQNKLKPEMDEKGYTNY-FGRCNVAEHEKLI---LLAQLKPVKDSDE----AVTYSLGKFGQRALDFYS-IHVTKESTHPVKPLAQIAGNRYASGSDACMGTIAQKVVKGNQKRLESLRENLEYPSVTLP-PQPHTKEGVDAYNEVIKPLLRLKGF--------PSFPWNTINEVKKLIDAKRD | |||||||||||||
9 | 6fthA | 0.06 | 0.01 | 0.21 | 0.26 | CNFpred | -------------SNVVMQKTATWMSKGGEEWDAYCKQLDSLGLQENVKIWQKWYDIYTKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5amqA | 0.05 | 0.03 | 0.70 | 0.67 | DEthreader | ------QTVNLILIHSLCKNLLADTSR--HN--HLRNRIERNNTISTFSSKSCTKFDRLYELLVLVIEQIMDM-MIDHKK----GEYAK---------KER-KL----------P-GDGK---------M-KW----QDVFYKYFLIADLKILFMCNMDKELI----RNWLQ----------DCAYIGPYLPIGVLDAPLSM----I-STVGLEGVASILTIFIVTFTEARL- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |