>PF17721 (233 residues) GSPTTAGYYGVRRSFTTELDFHNTKQFVSDVYSSPLGSKPFSCDSSATQGYPALLDPYLT NQYGDYRATPLTAGTSSFFSPSSVPPLLPSFPNDTAHFLLREPWEQTSPDSLSQADGACS DPLQALPASTSCLSSHESGGVSPYRSSGWTSAIPGAQSYPLHPLEDVHYSPSYAATPPCS FSPFMTVANELTSRMSHLSPEQSSETLPLHDNSAWAKEDGSPIWGTYEGRRTY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GSPTTAGYYGVRRSFTTELDFHNTKQFVSDVYSSPLGSKPFSCDSSATQGYPALLDPYLTNQYGDYRATPLTAGTSSFFSPSSVPPLLPSFPNDTAHFLLREPWEQTSPDSLSQADGACSDPLQALPASTSCLSSHESGGVSPYRSSGWTSAIPGAQSYPLHPLEDVHYSPSYAATPPCSFSPFMTVANELTSRMSHLSPEQSSETLPLHDNSAWAKEDGSPIWGTYEGRRTY | |||||||||||||||||||
1 | 1ny71 | 0.06 | 0.03 | 0.61 | 0.72 | DisCoVER | -PCMIASTPVTAVTFDLI-----------NGK-------------------------IT------P----V-----DDN-------WNT------HIYNPMLRTAAWKS----GTIHVQ-LNVRGAGVWDGQVF------VYLRQSMESYDARTFVISQPGSAMLNFSFDIIGFEFATWYLECVATNP-RQIQQFEVNMR--------FDP------NFRVAGNILMFLSTE- | |||||||||||||
2 | 4wjsA | 0.10 | 0.09 | 0.98 | 0.51 | CEthreader | IDQYPNDLLSLLQKHGVTNPFETTITLSAEPQAIFKVHAVSRLAHRIPGHGQPILSCQFSPVSSSRLATGSGDNTARIWDTDSGTPKFTLKGHTGWVLGVSWSWDPESGKQVNQEFRGHAKWVLALAWQPYHLWRDGTARLASASKDCTVRHKGSVSCVKWGGTDLIYTGSH-----DRSVRVWDAVKGTLVHNFTAHGHWVNHIALSSDHVLRTAYHDHTKEVPGTEEERRA | |||||||||||||
3 | 6qigA | 0.08 | 0.08 | 0.97 | 0.55 | EigenThreader | DPGHADLVLYITFDLEL---PDGNRQVRGLGGACSPTWSTGFDLGVTIAHQIGHSFGLEHDGSGHVMASDGAAPRAGLAWSPCSRRQLLSLLSAGRAR----CVWDPGSAGHPPDAQPGLYYCQALSCHTDPLDQSSCSRLLVPLLDGTECAVHGRWSSWGPRSPRRRQCNNPRPAFGGRACVGADLQAQLEFMSQQCARTHWGAAVPHSQGDALCRHMCRARGDSFLDGTRC | |||||||||||||
4 | 5vlbA1 | 0.15 | 0.03 | 0.20 | 0.34 | HHpred | -----------------------------------NVKDAEKWES-FIENASVFLGSWTPESVGDYASGVLPTYGYARMYS-GV----------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 4rlzA2 | 0.18 | 0.05 | 0.26 | 0.68 | MRFsearch | ----------------TIGELTNS-------------------------RFPAPIDQLYTSDVVVQPQNGRCSLDGELQGTTLAPAVGPNFPGEQILFFRSN----------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2xd8A3 | 0.11 | 0.09 | 0.83 | 0.48 | FFAS-3D | ---------------ATDKYALYLKLFSGEMFKG--------FQHETIAR-------------DLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPI--LGNADKAPPVAEKTIVMDDLLISSASATNFVEPGGTQIRVGSGTNESDAFTASALVNAFYDAAAAMDEKGPFLGKYGVKYG--GTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAA | |||||||||||||
7 | 5fvmC | 0.12 | 0.12 | 0.97 | 0.99 | SPARKS-K | LTGVCSRTIQHADSQVNRLEITSDKKY--LAAAGHLHVRLYDIRSNNPNGHKGNVTSIAFQQENRWPSVQRNYKHNAPVAIHPNQGELISCDQDGN-IRIWDLGENQCTNQLTPEDNTPLQSLSVASDGSMLVAGNNKGNCYVWRMPHHTDASTLEPVTKFKSHTKYITRVLLSADVKN----LATCSADHTARVWNIEDNDGHQRWVWDDSAYLVTSDHYVLWDLSEIVRQY | |||||||||||||
8 | 1w6jA | 0.03 | 0.02 | 0.71 | 0.67 | DEthreader | ------------------GANGMYWTGDYGGPLFL----------ARIPLYREIVYLRVQLPHIEDGNSIPITMRIPDYLWMGLDGMK-------MQGTGSQDTAAIQALLE--------------HEFLRLSQVPDNMRKGGFSSDCTAE-A-LKAV---------TYECTSAVQA---SWGVC----FTYGTGLFAMGQTYRTAASRACDFLLSRQMWGEIHNIGVFSCAI | |||||||||||||
9 | 2nbiA | 0.11 | 0.11 | 1.00 | 0.87 | MUSTER | DECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSP-DGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRDVLPTPQNINCPACCAFECRPDN | |||||||||||||
10 | 3j65q | 0.07 | 0.07 | 0.97 | 0.51 | CEthreader | DALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQ-------YTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHASFDNSIKLWDGRDGKFIHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDK | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |