Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MERRLIKKEMKKLLGDYIGIRLRENEFDPKGRRQLTFLDDMAHYDLAINVAFQWLDPSEDLAWLEWEEVKMPFHGRPIYPNRREREAMILSSYAGILMNSIPIEEVFKIYGADSSANSGTIKVPRVSSLHLSLHPFAMLTAPKAAEYARKQSVKSRKGPTNKNATSSSTKEANATEWKSSQRFSDTQPKNKV |
1 | 3dl8A | 0.07 | 0.06 | 0.81 | 0.59 | DisCoVER | | ------------DIDAIRGDYLKTIEFKL-EKGATTDDLLVEAFAVVREA-SRR-VT--GM-FPFKVQLMGGVALNIAEMEGKLTSTLPVYLNAKGVHVVTVNE---------YLASRDAEQMGKIFE--FLGLTVGLAYA-AD--IT--Y-STNNELGPLHFAVIDEVDSITFYFEKLAGMTGTVVTIPT- |
2 | 2hv7A | 0.10 | 0.07 | 0.70 | 0.67 | DEthreader | | RVSEAIEKLVALLNTLDRWIDETPP---------KAYRTWYALDEEAENL-VATVVPTHLAAAVP-EV----------------AVY-LKESVGNDYGHEAAFAAFLCCLKIGVLRV-----------------------MRKLQKT-R---Q-LPFIWGSLYLECILFITMHSQLLMYKCLIFKFPIHP-- |
3 | 3zdrA | 0.09 | 0.09 | 1.00 | 0.59 | CEthreader | | FVMTVPKHVTADTGMDVLTHAIEAYVSNMANDYTDGLAMKAIQLVFEYLPRAYQGADELAREKMHNASTIAGMAFANAFLGINHSLAHKLGAEFHIPHGTILMPHVIRYNAAKPKKYFKADQRYAEIARMLGLPARTTEEGVESLVQAIIKLAKQLDMPLSIEACGVSKQEFESKVEKLAELAFEDQTTANP |
4 | 4jzbA | 0.10 | 0.10 | 1.00 | 0.63 | EigenThreader | | VHRKGYLKSMMDTTCLGLCVVDVAEAMAKDTQMDVLHDACVCGWMIEMLQAHFLCWYINDGLILLAWATQMALHYFADRPFLAEVLRVFTTTIGQLYDVTSNHRRIVVYKTAYYTYVAMVMGEYFQVQDDVMDCFTSWLAVTFLTTAAAVAVIKQLYTEQNLLARFEEYEKAVVAEVEQLIAALEAQNAAFA |
5 | 6yacA | 0.23 | 0.19 | 0.81 | 0.38 | HHpred | | ------------NWSKYADFLTFRGGLDPLT--GGLWLTDIAHHHLAIAILFLIAGHMYRTNWLEAHK--GPFTGKGLYEILTTQLAMLLTIIVAHHMYAMPPAAIFMVRDYDPTTRYNDHRDAWV-CIFLGFHSFGLYGQPVFAQWIQNTHALAP-GTTAPGATT-----STSLTWGG------------- |
6 | 2vohA | 0.09 | 0.05 | 0.51 | 0.45 | MRFsearch | | --AESELMHIHSLAEHYLQYVLQVPAFESAPSQACRVLQRVAEVEKNLKSYLDDFHV-----------------------ESIDTARIIFNQVMEKEFEDINWGRIVTIFA----------------------------FGGVLLKKLKQE----------------------------------------- |
7 | 1fftA2 | 0.14 | 0.12 | 0.84 | 0.49 | FFAS-3D | | ----TIGFIVTFSVGGMTGVLLAVPGAD-FVLHNSLFLIAHFHNVIIFAGMTYWWPKAFGFKL-----------------NETWGKRAFWFWIIGFFVAFMPLYALGF---MGMTRRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDP-WGGRTLEWATSSPPPFYN----- |
8 | 5cofA | 0.10 | 0.08 | 0.77 | 0.63 | SPARKS-K | | QTKAELLLAIDKNFSKLISYTIPPEITSDKSDGHASVRDLVSYLLGWNALVVKWIAKGLPV--------DFPETGYKW-NQLGLLAQKFYSDYSELLVAELVKNEIVNLINDRTDDILYGRPWYTKWTGRISFNTS------SPYANANGRLRKWAKNNNISL----------------------------- |
9 | 3apcA | 0.15 | 0.07 | 0.46 | 0.56 | CNFpred | | LEDDDVLHYLLQLVQAVKFEPYHDSAL-------ARFLLKRGLRNKRIGHFLFWFLRSE----------------IAQSRHYQQRFAVILEAYLRGCGTAMDFTQQVQVIEM-------------------------------------------------------------------------------- |
10 | 6r9tA | 0.06 | 0.05 | 0.82 | 0.83 | DEthreader | | DESKHEIHSQVDAI-TAGTASVVNLTAG-PAETDYTAVGCAVTTISSNLTEMSR-GVKLLALLAAKGLAAVELLRSAQ-------------V---QAAASA-T-QTIAAAQASGPQPL--QS-K------SVPQAMQLSQCAKNLGTALA-ELRTAAAQENPTAKRQFVQSAKEVANSTALTILFEERA--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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